Email l.a.kelley@imperial.ac.uk Description P69380 Date Thu Jan 5 12:11:26 GMT 2012 Unique Job ID 5ea24a0ec4e6877c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2qfiB_ 100.0 100 PDB header:transport protein Chain: B: PDB Molecule:ferrous-iron efflux pump fief; PDBTitle: structure of the zinc transporter yiip 2 d2qfia2 100.0 100 Fold:Cation efflux protein transmembrane domain-like Superfamily:Cation efflux protein transmembrane domain-like Family:Cation efflux protein transmembrane domain-like 3 c2zztA_ 99.6 25 PDB header:transport protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the cytosolic domain of the cation2 diffusion facilitator family protein 4 d3bypa1 99.6 34 Fold:Alpha-lytic protease prodomain-like Superfamily:Cation efflux protein cytoplasmic domain-like Family:Cation efflux protein cytoplasmic domain-like 5 d2qfia1 99.5 100 Fold:Alpha-lytic protease prodomain-like Superfamily:Cation efflux protein cytoplasmic domain-like Family:Cation efflux protein cytoplasmic domain-like 6 d1dlca3 58.5 18 Fold:Toxins' membrane translocation domains Superfamily:delta-Endotoxin (insectocide), N-terminal domain Family:delta-Endotoxin (insectocide), N-terminal domain 7 d1ghha_ 57.6 15 Fold:DNA damage-inducible protein DinI Superfamily:DNA damage-inducible protein DinI Family:DNA damage-inducible protein DinI 8 c3qovD_ 56.2 9 PDB header:ligase Chain: D: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of a hypothetical acyl-coa ligase (bt_0428) from2 bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution 9 c2y4oA_ 53.7 16 PDB header:ligase Chain: A: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of paak2 in complex with phenylacetyl adenylate 10 c3cd0B_ 53.3 14 PDB header:oxidoreductase Chain: B: PDB Molecule:3-hydroxy-3-methylglutaryl-coenzyme a reductase; PDBTitle: thermodynamic and structure guided design of statin hmg-coa2 reductase inhibitors 11 d1ji6a3 45.8 15 Fold:Toxins' membrane translocation domains Superfamily:delta-Endotoxin (insectocide), N-terminal domain Family:delta-Endotoxin (insectocide), N-terminal domain 12 c1hwjB_ 45.5 14 PDB header:oxidoreductase Chain: B: PDB Molecule:hmg-coa reductase; PDBTitle: complex of the catalytic portion of human hmg-coa reductase2 with cerivastatin 13 c1ji6A_ 42.2 16 PDB header:toxin Chain: A: PDB Molecule:pesticidial crystal protein cry3bb; PDBTitle: crystal structure of the insecticidal bacterial del2 endotoxin cry3bb1 bacillus thuringiensis 14 c2y27B_ 41.8 12 PDB header:ligase Chain: B: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of paak1 in complex with atp from2 burkholderia cenocepacia 15 c3rfuC_ 39.6 11 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase 16 d1f06a2 35.8 19 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Dihydrodipicolinate reductase-like 17 d1dqaa1 35.5 14 Fold:Ferredoxin-like Superfamily:NAD-binding domain of HMG-CoA reductase Family:NAD-binding domain of HMG-CoA reductase 18 c3eb7B_ 32.0 15 PDB header:toxin Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1; PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution 19 c1dlcA_ 31.5 18 PDB header:toxin Chain: A: PDB Molecule:delta-endotoxin cryiiia; PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution 20 d1wh9a_ 31.3 12 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 21 d1ib8a2 not modelled 29.7 8 Fold:Alpha-lytic protease prodomain-like Superfamily:YhbC-like, N-terminal domain Family:YhbC-like, N-terminal domain 22 d1u8sa1 not modelled 29.1 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:Glycine cleavage system transcriptional repressor 23 c2jo1A_ not modelled 27.0 9 PDB header:hydrolase regulator Chain: A: PDB Molecule:phospholemman; PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles 24 c3b64A_ not modelled 24.4 13 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 25 c1u8sB_ not modelled 21.7 15 PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor 26 d1uwda_ not modelled 19.3 17 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 27 c2jp3A_ not modelled 18.7 0 PDB header:transcription Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles 28 c3abfB_ not modelled 17.4 9 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242) 29 d1fftb2 not modelled 16.8 15 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 30 d1zpva1 not modelled 16.7 6 Fold:Ferredoxin-like Superfamily:ACT-like Family:SP0238-like 31 c3laxA_ not modelled 16.3 6 PDB header:ligase Chain: A: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: the crystal structure of a domain of phenylacetate-coenzyme2 a ligase from bacteroides vulgatus atcc 8482 32 c3eynB_ not modelled 16.1 8 PDB header:ligase Chain: B: PDB Molecule:acyl-coenzyme a synthetase acsm2a; PDBTitle: crystal structure of human acyl-coa synthetase medium-chain2 family member 2a (l64p mutation) in a complex with coa 33 d1u8sa2 not modelled 15.5 14 Fold:Ferredoxin-like Superfamily:ACT-like Family:Glycine cleavage system transcriptional repressor 34 c3etcB_ not modelled 14.8 7 PDB header:ligase Chain: B: PDB Molecule:amp-binding protein; PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298 35 c2zxeG_ not modelled 12.8 6 PDB header:hydrolase/transport protein Chain: G: PDB Molecule:phospholemman-like protein; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 36 d1x38a2 not modelled 11.7 25 Fold:Flavodoxin-like Superfamily:Beta-D-glucan exohydrolase, C-terminal domain Family:Beta-D-glucan exohydrolase, C-terminal domain 37 c2ns6A_ not modelled 11.7 17 PDB header:hydrolase Chain: A: PDB Molecule:mobilization protein a; PDBTitle: crystal structure of the minimal relaxase domain of moba2 from plasmid r1162 38 c3kxwA_ not modelled 11.6 9 PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila 39 c3hvwA_ not modelled 11.1 13 PDB header:lyase Chain: A: PDB Molecule:diguanylate-cyclase (dgc); PDBTitle: crystal structure of the ggdef domain of the pa2567 protein2 from pseudomonas aeruginosa, northeast structural genomics3 consortium target par365c 40 c2iqcA_ not modelled 9.8 14 PDB header:protein binding Chain: A: PDB Molecule:fanconi anemia group f protein; PDBTitle: crystal structure of human fancf protein that functions in2 the assembly of a dna damage signaling complex 41 d1q8ba_ not modelled 9.8 10 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Hypothetical protein YjcS 42 c3gacD_ not modelled 9.7 23 PDB header:cytokine Chain: D: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: structure of mif with hpp 43 d2cu6a1 not modelled 9.5 16 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 44 d1rq2a2 not modelled 9.4 18 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 45 d1mlia_ not modelled 9.4 5 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Muconalactone isomerase, MLI 46 d2aala1 not modelled 9.2 13 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MSAD-like 47 c2x4kB_ not modelled 8.9 7 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa) 48 d1wzua1 not modelled 8.8 19 Fold:NadA-like Superfamily:NadA-like Family:NadA-like 49 c3mb2G_ not modelled 8.3 16 PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 50 c1ex1A_ not modelled 7.9 25 PDB header:hydrolase Chain: A: PDB Molecule:protein (beta-d-glucan exohydrolase isoenzyme exo1); PDBTitle: beta-d-glucan exohydrolase from barley 51 d1lcia_ not modelled 7.7 11 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 52 d1rwua_ not modelled 7.7 8 Fold:Ferredoxin-like Superfamily:YbeD/HP0495-like Family:YbeD-like 53 c1rwuA_ not modelled 7.7 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0250 protein ybed; PDBTitle: solution structure of conserved protein ybed from e. coli 54 c3e7wA_ not modelled 7.4 14 PDB header:ligase Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1; PDBTitle: crystal structure of dlta: implications for the reaction2 mechanism of non-ribosomal peptide synthetase (nrps)3 adenylation domains 55 c1v55B_ not modelled 7.3 9 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: bovine heart cytochrome c oxidase at the fully reduced state 56 c3mlcC_ not modelled 7.2 19 PDB header:isomerase Chain: C: PDB Molecule:fg41 malonate semialdehyde decarboxylase; PDBTitle: crystal structure of fg41msad inactivated by 3-chloropropiolate 57 c3m20A_ not modelled 7.0 10 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 58 d1uf0a_ not modelled 6.8 8 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 59 d1xhja_ not modelled 6.8 11 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like 60 c2qs0A_ not modelled 6.7 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:quinolinate synthetase a; PDBTitle: quinolinate synthase from pyrococcus furiosus 61 c3ry0A_ not modelled 6.6 10 PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway 62 c2zkqc_ not modelled 6.5 13 PDB header:ribosomal protein/rna Chain: C: PDB Molecule:rna expansion segment es4; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 63 c3dptB_ not modelled 6.4 17 PDB header:signaling protein Chain: B: PDB Molecule:rab family protein; PDBTitle: cor domain of rab family protein (roco) 64 c1r7iB_ not modelled 6.4 14 PDB header:oxidoreductase Chain: B: PDB Molecule:3-hydroxy-3-methylglutaryl-coenzyme a reductase; PDBTitle: hmg-coa reductase from p. mevalonii, native structure at 2.2 angstroms2 resolution. 65 c2kz0A_ not modelled 6.4 26 PDB header:transcription Chain: A: PDB Molecule:bola family protein; PDBTitle: solution structure of a bola protein (ech_0303) from ehrlichia2 chaffeensis. seattle structural genomics center for infectious3 disease target ehcha.10365.a 66 c3ibwA_ not modelled 6.3 3 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 67 c2zw2B_ not modelled 6.3 15 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 68 c3nyrA_ not modelled 6.3 18 PDB header:ligase Chain: A: PDB Molecule:malonyl-coa ligase; PDBTitle: malonyl-coa ligase ternary product complex with malonyl-coa and amp2 bound 69 c2dbbA_ not modelled 6.2 11 PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 70 d1uxya2 not modelled 6.1 20 Fold:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain Superfamily:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain Family:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 71 d2cfxa2 not modelled 6.1 3 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 72 c2qieA_ not modelled 6.1 10 PDB header:transferase Chain: A: PDB Molecule:molybdopterin-converting factor subunit 2; PDBTitle: staphylococcus aureus molybdopterin synthase in complex2 with precursor z 73 d1iwga3 not modelled 6.0 8 Fold:Ferredoxin-like Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 74 c3lnoA_ not modelled 6.0 11 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis 75 d1gyxa_ not modelled 6.0 18 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 76 c3ac0B_ not modelled 6.0 25 PDB header:hydrolase Chain: B: PDB Molecule:beta-glucosidase i; PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose 77 d2vapa2 not modelled 5.9 28 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 78 d2ia7a1 not modelled 5.8 7 Fold:gpW/gp25-like Superfamily:gpW/gp25-like Family:gpW/gp25-like 79 c2op8A_ not modelled 5.8 9 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 80 d1ofua2 not modelled 5.7 21 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 81 d2b3ja1 not modelled 5.7 12 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like 82 c2xq2A_ not modelled 5.7 17 PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt 83 d2i1sa1 not modelled 5.6 15 Fold:MM3350-like Superfamily:MM3350-like Family:MM3350-like 84 c2x41A_ not modelled 5.6 25 PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana2 in complex with glucose 85 c3brtC_ not modelled 5.5 29 PDB header:transferase/transcription Chain: C: PDB Molecule:inhibitor of nuclear factor kappa-b kinase PDBTitle: nemo/ikk association domain structure 86 c2e1cA_ not modelled 5.4 10 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 87 d1otfa_ not modelled 5.4 18 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 88 d1hp3a_ not modelled 5.4 31 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins 89 c3dhvA_ not modelled 5.4 11 PDB header:ligase Chain: A: PDB Molecule:d-alanine-poly(phosphoribitol) ligase; PDBTitle: crystal structure of dlta protein in complex with d-alanine2 adenylate 90 c3gdzA_ not modelled 5.3 14 PDB header:ligase Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of arginyl-trna synthetase from klebsiella2 pneumoniae subsp. pneumoniae 91 c1s1hC_ not modelled 5.3 13 PDB header:ribosome Chain: C: PDB Molecule:40s ribosomal protein s3; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 92 c1ypxA_ not modelled 5.3 15 PDB header:transferase Chain: A: PDB Molecule:putative vitamin-b12 independent methionine synthase family PDBTitle: crystal structure of the putative vitamin-b12 independent methionine2 synthase from listeria monocytogenes, northeast structural genomics3 target lmr13 93 c2vv5D_ not modelled 5.3 14 PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs 94 d2atza1 not modelled 5.3 10 Fold:Prim-pol domain Superfamily:Prim-pol domain Family:HP0184-like 95 c1ib8A_ not modelled 5.3 12 PDB header:nucleic acid binding protein Chain: A: PDB Molecule:conserved protein sp14.3; PDBTitle: solution structure and function of a conserved protein2 sp14.3 encoded by an essential streptococcus pneumoniae3 gene 96 c2khuA_ not modelled 5.2 7 PDB header:transferase/protein binding Chain: A: PDB Molecule:immunoglobulin g-binding protein g, dna PDBTitle: solution structure of the ubiquitin-binding motif of human2 polymerase iota 97 c3fwtA_ not modelled 5.0 10 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: crystal structure of leishmania major mif2 98 c3lk6A_ not modelled 5.0 27 PDB header:hydrolase Chain: A: PDB Molecule:lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase n318d mutant (ybbd_n318d) from bacillus subtilis 99 d1g9pa_ not modelled 5.0 31 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins