Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3dptB_

Fold library idPDB HeaderMoleculeTitle
c3dptB_PDB header: signaling proteinChain: B: PDB Molecule: rab family protein;PDBTitle: cor domain of rab family protein (roco)


Added to library: Tue Mar 16 13:20:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APSWIKVKEKLVEATTAQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLGIVLYFEALDLSEIYVLDP
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
SS
SS

STTSSB

TTT

GGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence HWVTIGVYRIINSSKTKNGHLNTSALGYILNEEKFTYTLLEQRYLLDIMKQFELCYDEGKGLFIIPSNLP
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) SGGGTTSGGGT





TTS

SSS
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQIDNEPEITEGEPLRFIMKYDYLPSTIIPRLMIAMQHQILDRMQWRYGMVLKSQDHEGALAKVVAETKD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S

TT




TT

SS

TTTGGGTT
TTTTS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence STITIAIQGEPRCKREYLSIIWYEIKKINANFTNLDVKEFIPLPGHPDELVEYKELLGLEKMGRDEYVSG
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TSSTTSTT

TTTT

T
 .........290.........
Sequence KLEKVFSVSKMLDSVISKE
Predicted secondary structure







SS confidence


















Known secondary structure (DSSP) TTTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D