Fold library entry viewer: d1lcia_

Added to library: Tue Mar 16 13:21:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	N	I	K	K	G	P	A	P	F	Y	P	L	E	D	G	T	A	G	E	Q	L	H	K	A	M	K	R	Y	A	L	V	P	G	T	I	A	F	T	D	A	H	I	E	V	N	I	T	Y	A	E	Y	F	E	M	S	V	R	L	A	E	A	M	K	R	Y	G	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S							S	S				S	S															T	S	T	T							T	T	T																								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	N	H	R	I	V	V	C	S	E	N	S	L	Q	F	F	M	P	V	L	G	A	L	F	I	G	V	A	V	A	P	A	N	D	I	Y	N	E	R	E	L	L	N	S	M	N	I	S	Q	P	T	V	V	F	V	S	K	K	G	L	Q	K	I	L	N	V	Q	K	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	S		S	S	T											T								T	T																S						G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	I	I	Q	K	I	I	I	M	D	S	K	T	D	Y	Q	G	F	Q	S	M	Y	T	F	V	T	S	H	L	P	P	G	F	N	E	Y	D	F	V	P	E	S	F	D	R	D	K	T	I	A	L	I	M	N	S	L	P	K	G	V	A	L	P	H	R	T	A	C	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							T	T		S	S		B	T	T	B											S		T	T			T	T	T								T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	S	H	A	R	D	P	I	F	G	N	Q	I	I	P	D	T	A	I	L	S	V	V	P	F	H	H	G	F	G	M	F	T	T	L	G	Y	L	I	C	G	F	R	V	V	L	M	Y	R	F	E	E	E	L	F	L	R	S	L	Q	D	Y	K	I	Q	S	A	L	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		T	T	T	S					T	T							S		T	T	S														T							S	S													T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	T	L	F	S	F	F	A	K	S	T	L	I	D	K	Y	D	L	S	N	L	H	E	I	A	S	G	G	A	P	L	S	K	E	V	G	E	A	V	A	K	R	F	H	L	P	G	I	R	Q	G	Y	G	L	T	E	T	T	S	A	I	L	I	T	P	E	G	P	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		G	G	G	S			T	T							T	T															T	T		S			B						G	G	G	S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	G	K	V	V	P	F	F	E	A	K	V	V	D	L	D	T	G	K	T	L	G	V	N	Q	R	G	E	L	C	V	R	G	P	M	I	M	S	G	Y	V	N	N	P	E	A	T	N	A	L	I	D	K	D	G	W	L	H	S	G	D	I	A	Y	W	D	E	D	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				T	T								T	T	T			B			T	T									S	T	T	S		S			T	T	B								B		T	T	S												T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	F	I	V	L	I	K	Y	K	G	Y	Q	V	A	P	A	E	L	E	S	I	L	L	Q	H	P	N	I	F	D	A	G	V	A	G	L	P	D	D	D	A	G	E	L	P	A	A	V	V	V	L	E	H	G	K	T	M	T	E	K	E	I	V	D	Y	V	A	S	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T														T	S	T	T												T	T	T												T	T																S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Sequence	T	T	A	K	K	L	R	G	G	V	V	F	V	D	E	V	P	K	L	D	A	R	K	I	R	E	I	L	I	K	A	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S		T	T						S	S																	T

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PDB structure

FASTA sequence

Hidden Markov model

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