Fold library entry viewer: c1dlcA_

Added to library: Tue Mar 16 13:28:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	K	D	V	I	Q	K	G	I	S	V	V	G	D	L	L	G	V	V	G	F	P	F	G	G	A	L	V	S	F	Y	T	N	F	L	N	T	I	W	P	S	E	D	P	W	K	A	F	M	E	Q	V	E	A	L	M	D	Q	K	I	A	D	Y	A	K	N	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S		B	S																	T	S	S	S																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	L	Q	G	L	Q	N	N	V	E	D	Y	V	S	A	L	S	S	W	Q	K	N	P	V	S	S	R	N	P	H	S	Q	G	R	I	R	E	L	F	S	Q	A	E	S	H	F	R	N	S	M	P	S	F	A	I	S	G	Y	E	V	L	F	L	T	T	Y	A	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		T	T	S																								G	G	G	G	S		T	T		T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	N	T	H	L	F	L	L	K	D	A	Q	I	Y	G	E	E	W	G	Y	E	K	E	D	I	A	E	F	Y	K	R	Q	L	K	L	T	Q	E	Y	T	D	H	C	V	K	W	Y	N	V	G	L	D	K	L	R	G	S	S	Y	E	S	W	V	N	F	N	R	Y	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	T																																			T			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	M	T	L	T	V	L	D	L	I	A	L	F	P	L	Y	D	V	R	L	Y	P	K	E	V	K	T	E	L	T	R	D	V	L	T	D	P	I	V	G	V	N	N	L	R	G	Y	G	T	T	F	S	N	I	E	N	Y	I	R	K	P	H	L	F	D	Y	L	H	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T					T	T	G	G	G	G		T	T	T			S	B																S		S			T	T		S								T	T	S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	F	H	T	R	F	Q	P	G	Y	Y	G	N	D	S	F	N	Y	W	S	G	N	Y	V	S	T	R	P	S	I	G	S	N	D	I	I	T	S	P	F	Y	G	N	K	S	S	E	P	V	Q	N	L	E	F	N	G	E	K	V	Y	R	A	V	A	N	T	N	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	T	T															S	T	T															S	S								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	P	S	A	V	Y	S	G	V	T	K	V	E	F	S	Q	Y	N	D	Q	T	D	E	A	S	T	Q	T	Y	D	S	K	R	N	V	G	A	V	S	W	D	S	I	D	Q	L	P	P	E	T	T	D	E	P	L	E	K	G	Y	S	H	Q	L	N	Y	V	M	C	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																T	T	T	T										S	S									G	G	G	T	S			S		S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	Q	G	S	R	G	T	I	P	V	L	T	W	T	H	K	S	V	D	F	F	N	M	I	D	S	K	K	I	T	Q	L	P	L	V	K	A	Y	K	L	Q	S	G	A	S	V	V	A	G	P	R	F	T	G	G	D	I	I	Q	C	T	E	N	G	S	A	A	T	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G												T	T			T	T					S	S	S						G	G	G		S				T	T								S	S	S	S	S							S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	T	P	D	V	S	Y	S	Q	K	Y	R	A	R	I	H	Y	A	S	T	S	Q	I	T	F	T	L	S	L	D	G	A	P	F	N	Q	Y	Y	F	D	K	T	I	N	K	G	D	T	L	T	Y	N	S	F	N	L	A	S	F	S	T	P	F	E	L	S	G	N	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S													S	S									T	T														T	T					G	G	G							S	S							S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Sequence	Q	I	G	V	T	G	L	S	A	G	D	K	V	Y	I	D	K	I	E	F	I	P	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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