PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1u8sB_

Fold library id	PDB Header	Molecule	Title
c1u8sB_	PDB header: transcription	Chain: B: PDB Molecule: glycine cleavage system transcriptional	PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor

Links to external resources
Added to library: Tue Mar 16 12:00:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L T Q H L V I T A V G T D R P G I C N E V V R L V T Q A G C N I I D S R I A M F G K E F T L L M L I S G S P S N I T R V E T T L P L L G Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q H D L I T M M K R T S P H D H Q T H A Y T V E V Y V E S D D K L G L T E K F T Q F F A Q R Q I G M A S L S A Q T I S K N Q F H I A I S A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . .

Sequence V D S G C N L M Q L Q E E F D A L C T A L D V Q G S L N F I K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	T	Q	H	L	V	I	T	A	V	G	T	D	R	P	G	I	C	N	E	V	V	R	L	V	T	Q	A	G	C	N	I	I	D	S	R	I	A	M	F	G	K	E	F	T	L	L	M	L	I	S	G	S	P	S	N	I	T	R	V	E	T	T	L	P	L	L	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T											T	T	T												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	H	D	L	I	T	M	M	K	R	T	S	P	H	D	H	Q	T	H	A	Y	T	V	E	V	Y	V	E	S	D	D	K	L	G	L	T	E	K	F	T	Q	F	F	A	Q	R	Q	I	G	M	A	S	L	S	A	Q	T	I	S	K	N	Q	F	H	I	A	I	S	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																	S										S			T	T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Sequence	V	D	S	G	C	N	L	M	Q	L	Q	E	E	F	D	A	L	C	T	A	L	D	V	Q	G	S	L	N	F	I	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S																T	T