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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2qfiB_

Fold library idPDB HeaderMoleculeTitle
c2qfiB_PDB header: transport proteinChain: B: PDB Molecule: ferrous-iron efflux pump fief;PDBTitle: structure of the zinc transporter yiip


Added to library: Tue Mar 16 13:57:25 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFG
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Known secondary structure (DSSP)

SSSSTTSGGGTTSSSBTTB



TTSS






TTTTSSSS
STTSS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQS
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Known secondary structure (DSSP)

TTTTTTTSSSTTGGGSS
TTSSTTTSSSSTTTS




GGGSS
GGGGTTTGGG

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEE
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Known secondary structure (DSSP) TTSGGGGGGT

SSTT


TTSS
SSTTSSSSSSTTTTTTTTGGGSS




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQ
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Known secondary structure (DSSP) TTSSS
S
B





TTS

B

BS
TTTTTT
S
GGGGTTSSS

S

B

B
 ......
Sequence DPCSVV
Predicted secondary structure




SS confidence





Known secondary structure (DSSP)

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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