Email l.a.kelley@imperial.ac.uk Description P37657 Date Thu Jan 5 11:56:30 GMT 2012 Unique Job ID 51df013406728e6c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ubea1 95.0 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 2 d1mo6a1 94.8 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 3 c1u9iA_ 94.0 7 PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites 4 d1xp8a1 92.0 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 5 d1u94a1 91.7 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 6 d1tf7a2 88.7 7 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 7 d1n0wa_ 85.4 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 8 c2zroA_ 85.1 13 PDB header:hydrolase Chain: A: PDB Molecule:protein reca; PDBTitle: msreca adp form iv 9 c2cvhB_ 84.3 13 PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase 10 c2recB_ 83.9 15 PDB header:helicase PDB COMPND: 11 c1xp8A_ 79.3 16 PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" 12 c3hr8A_ 79.0 12 PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca 13 c3c85A_ 70.5 12 PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus 14 d1szpa2 69.0 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 15 d7reqa2 59.2 12 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 16 c2ztsB_ 57.4 11 PDB header:atp-binding protein Chain: B: PDB Molecule:putative uncharacterized protein ph0186; PDBTitle: crystal structure of kaic-like protein ph0186 from2 hyperthermophilic archaea pyrococcus horikoshii ot3 17 c2g1uA_ 53.3 12 PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution 18 d1tf7a1 52.0 9 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 19 c3fwzA_ 45.9 18 PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli 20 c2q6tB_ 42.8 9 PDB header:hydrolase Chain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer 21 d1id1a_ not modelled 40.8 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 22 d2i1qa2 not modelled 35.9 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 23 d1fmfa_ not modelled 34.1 14 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 24 c1szpC_ not modelled 33.0 13 PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament 25 d1b74a1 not modelled 33.0 7 Fold:ATC-like Superfamily:Aspartate/glutamate racemase Family:Aspartate/glutamate racemase 26 d3bula2 not modelled 29.9 15 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 27 c3eywA_ not modelled 28.6 13 PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff 28 c1y80A_ not modelled 27.5 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica 29 c2w0mA_ not modelled 23.7 8 PDB header:unknown function Chain: A: PDB Molecule:sso2452; PDBTitle: crystal structure of sso2452 from sulfolobus solfataricus2 p2 30 d1lssa_ not modelled 22.7 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 31 c3mjsA_ not modelled 22.1 11 PDB header:oxidoreductase Chain: A: PDB Molecule:amphb; PDBTitle: structure of a-type ketoreductases from modular polyketide synthase 32 c3cq0B_ not modelled 20.7 19 PDB header:transferase Chain: B: PDB Molecule:putative transaldolase ygr043c; PDBTitle: crystal structure of tal2_yeast 33 c2dflA_ not modelled 19.1 15 PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament 34 c3qatB_ not modelled 19.0 17 PDB header:transferase Chain: B: PDB Molecule:malonyl coa-acyl carrier protein transacylase; PDBTitle: crystal structure of acyl-carrier-protein-s-malonyltransferase from2 bartonella henselae 35 c2zjbB_ not modelled 18.3 13 PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant 36 c2xoaA_ not modelled 16.7 16 PDB header:metal transport Chain: A: PDB Molecule:ryanodine receptor 1; PDBTitle: crystal structure of the n-terminal three domains of the2 skeletal muscle ryanodine receptor (ryr1) 37 d1skyb3 not modelled 15.5 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 38 c3s93B_ not modelled 15.4 12 PDB header:transcription Chain: B: PDB Molecule:tudor domain-containing protein 5; PDBTitle: crystal structure of conserved motif in tdrd5 39 d1oaia_ not modelled 15.3 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 40 c3bh0A_ not modelled 15.2 9 PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p 41 d1go5a_ not modelled 15.1 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 42 c1yqtA_ not modelled 14.8 10 PDB header:hydrolyase/translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor 43 d1ccwa_ not modelled 14.3 12 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 44 c2vyeA_ not modelled 13.5 6 PDB header:hydrolase Chain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex 45 c1yodB_ not modelled 13.0 30 PDB header:de novo protein Chain: B: PDB Molecule:water-solublized phospholamban; PDBTitle: crystal structure of a water soluble analog of phospholamban 46 c2iy3A_ not modelled 12.8 16 PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome 47 d3dhwc1 not modelled 12.7 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 48 c3io5B_ not modelled 12.4 10 PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 49 c1yodA_ not modelled 12.1 30 PDB header:de novo protein Chain: A: PDB Molecule:water-solublized phospholamban; PDBTitle: crystal structure of a water soluble analog of phospholamban 50 d3e9la1 not modelled 12.0 50 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Prp8 beta-finger domain-like 51 d3e9oa1 not modelled 11.9 31 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Prp8 beta-finger domain-like 52 c2yhsA_ not modelled 11.5 15 PDB header:cell cycle Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the e. coli srp receptor ftsy 53 d1t6sa1 not modelled 11.5 6 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ScpB/YpuH-like 54 d2g1la1 not modelled 10.7 25 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 55 c3e66B_ not modelled 10.6 31 PDB header:splicing Chain: B: PDB Molecule:prp8; PDBTitle: crystal structure of the beta-finger domain of yeast prp8 56 c3f6cB_ not modelled 10.4 9 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 57 c1vciA_ not modelled 10.4 8 PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp 58 c2j37W_ not modelled 10.4 7 PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs 59 d1nlfa_ not modelled 10.3 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 60 d2b4aa1 not modelled 10.2 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 61 c3dm5A_ not modelled 10.2 14 PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. 62 d1oi7a1 not modelled 10.1 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 63 c2it1B_ not modelled 9.9 6 PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii 64 c1oxtB_ not modelled 9.8 18 PDB header:transport protein Chain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus 65 d2fy8a1 not modelled 9.8 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 66 c3r1fO_ not modelled 9.7 17 PDB header:transcription Chain: O: PDB Molecule:esx-1 secretion-associated regulator espr; PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis 67 c2qy9A_ not modelled 9.7 14 PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy 68 c1wr4A_ not modelled 9.7 29 PDB header:ligase Chain: A: PDB Molecule:ubiquitin-protein ligase nedd4-2; PDBTitle: solution structure of the second ww domain of nedd4-2 69 d1vpra1 not modelled 9.7 38 Fold:Lipocalins Superfamily:Lipocalins Family:Dinoflagellate luciferase repeat 70 d1np7a2 not modelled 9.7 13 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 71 c2d62A_ not modelled 9.5 10 PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein 72 c3pfmA_ not modelled 9.4 40 PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf 73 d1v5wa_ not modelled 9.2 13 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 74 c1xnlA_ not modelled 9.2 42 PDB header:viral protein Chain: A: PDB Molecule:membrane protein gp37; PDBTitle: aslv fusion peptide 75 c3t8yA_ not modelled 9.2 11 PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb 76 c3eulB_ not modelled 9.1 17 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 77 d1jbea_ not modelled 9.0 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 78 c3ldaA_ not modelled 9.0 13 PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant 79 c2jp7A_ not modelled 8.9 10 PDB header:translation Chain: A: PDB Molecule:mrna export factor mex67; PDBTitle: nmr structure of the mex67 uba domain 80 c1vp7D_ not modelled 8.8 21 PDB header:hydrolase Chain: D: PDB Molecule:exodeoxyribonuclease vii small subunit; PDBTitle: crystal structure of exodeoxyribonuclease vii small subunit2 (np_881400.1) from bordetella pertussis at 2.40 a resolution 81 d1owla2 not modelled 8.5 20 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 82 c1m7lA_ not modelled 8.4 27 PDB header:sugar binding protein Chain: A: PDB Molecule:pulmonary surfactant-associated protein d; PDBTitle: solution structure of the coiled-coil trimerization domain2 from lung surfactant protein d 83 c2r8rB_ not modelled 8.2 33 PDB header:transferase Chain: B: PDB Molecule:sensor protein; PDBTitle: crystal structure of the n-terminal region (19..243) of sensor protein2 kdpd from pseudomonas syringae pv. tomato str. dc3000 84 c1t4gA_ not modelled 8.2 16 PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp 85 d1fx0a3 not modelled 8.1 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 86 c3hv9A_ not modelled 8.1 15 PDB header:hydrolase Chain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx eal domain from pseudomonas aeruginosa 87 c3pihA_ not modelled 8.0 20 PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna 88 c2knjA_ not modelled 7.9 33 PDB header:antimicrobial protein Chain: A: PDB Molecule:microplusin preprotein; PDBTitle: nmr structure of microplusin a antimicrobial peptide from2 rhipicephalus (boophilus) microplus 89 c1y7pB_ not modelled 7.8 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein af1403; PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator 90 c2lf3A_ not modelled 7.8 29 PDB header:signaling protein Chain: A: PDB Molecule:effector protein hopab3; PDBTitle: solution nmr structure of hoppmal_281_385 from pseudomonas syringae2 pv. maculicola str. es4326, midwest center for structural genomics3 target apc40104.5 and northeast structural genomics consortium target4 pst2a 91 c1skyE_ not modelled 7.7 17 PDB header:atp synthase Chain: E: PDB Molecule:f1-atpase; PDBTitle: crystal structure of the nucleotide free alpha3beta3 sub-complex of2 f1-atpase from the thermophilic bacillus ps3 92 c1qzwC_ not modelled 7.7 13 PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication 93 d1a8oa_ not modelled 7.6 18 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 94 c2nq2C_ not modelled 7.5 10 PDB header:metal transport Chain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. 95 d1p6qa_ not modelled 7.5 15 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 96 d1qrjb1 not modelled 7.3 22 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 97 d1tu1a_ not modelled 7.2 18 Fold:Mog1p/PsbP-like Superfamily:Mog1p/PsbP-like Family:PA0094-like 98 d2veaa2 not modelled 7.2 10 Fold:Profilin-like Superfamily:GAF domain-like Family:Phytochrome-specific domain 99 c3d31B_ not modelled 7.2 12 PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans