Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d3e9oa1

Fold library idFoldSuperfamilyFamily
d3e9oa1Ribonuclease H-like motifRibonuclease H-likePrp8 beta-finger domain-like


Added to library: Tue Mar 16 13:21:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XNSSNYAELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQKR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

TTSGGGGGSSS

TTSS
TTS


TTT

GGGGTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSQLAKWKTAEEVSALVRSLPKEEQPKQIIVTRKAXLDPLEVHXLDFPNIAIRPTELRLPFSAAXSIDKL
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) S
TTTS
SSSGGGTTT
TTS


S


GGGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDVVXKATEPQXVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKXILLSDPTITIKSYHLWPSFT
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
SS
TTTTGGGTS


STT



TT
SS



 .........220.........230.........240.........250...
Sequence DEQWITIESQXRDLILTEYGRKYNVNISALTQTEIKDIILGQN
Predicted secondary structure












SS confidence










































Known secondary structure (DSSP) T

GGGS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D