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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d3e9la1

Fold library idFoldSuperfamilyFamily
d3e9la1Ribonuclease H-like motifRibonuclease H-likePrp8 beta-finger domain-like


Added to library: Tue Mar 16 11:55:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAG
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Known secondary structure (DSSP)

TTTGGGGGSSS

TTSS
SSS


TTT

GGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKV
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Known secondary structure (DSSP)
S
S
GGGS
SSSGGGTTT
TT
SS


GGGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWP
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Known secondary structure (DSSP)
SS
TTTTGGGTS

T

STT



TT
SS
 .........220.........230.........240.........250.......
Sequence TLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEI
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Known secondary structure (DSSP)


T

GGG

T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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