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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1u9iA_

Fold library idPDB HeaderMoleculeTitle
c1u9iA_PDB header: circadian clock proteinChain: A: PDB Molecule: kaic;PDBTitle: crystal structure of circadian clock protein kaic with2 phosphorylation sites


Added to library: Tue Mar 16 13:22:09 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDI
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Known secondary structure (DSSP)

SS





TTTTSSTTSSTTSS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQ
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Known secondary structure (DSSP) GGGT

TTS



SS

S

SST
S
STTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEIL
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Known secondary structure (DSSP) T

T

SSSSS
SSTTS

S
STT

 .........220.........230.........240.........250.........260.........270.........280
Sequence KLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTG
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Known secondary structure (DSSP) TTS



STT

TTT

S








S
TTSSSS

TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQII
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Known secondary structure (DSSP) TTT

SSS
TTS

TTS



GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHIITD
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Known secondary structure (DSSP) TT

S
TSSS
TT

SSSS


SS
SS



S
 .........430.........440.........450.........460.........470.........480..
Sequence TIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRI
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Known secondary structure (DSSP) TTSSS






SS

TT

TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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