PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1y7pB_

Fold library id	PDB Header	Molecule	Title
c1y7pB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: hypothetical protein af1403;	PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator

Links to external resources
Added to library: Tue Mar 16 13:06:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G H M L R G L R I I A E N K I G V L R D L T T I I A E E G G N I T F A Q T F L I K H G E H E G K A L I Y F E I E G G D F E K I L E R V K T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S G G G T T S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D Y I I E I E E E E S F E R V F G K R V I I L G G G A L V S Q V A I G A I S E A D R H N L R G E R I S V D T M P V V G E E E I A E A V K A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S S
S G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S R L H R A E V L V L A G G I M G G K I T E E V K K L R K S G I R V I S L S M F G S V P D V A D V V I S D P V M A G T L A V M H I S E K A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S T T S S B
T T T
S
B S S S S S
T T S

. . . . . . .

Sequence F D L D R V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	M	L	R	G	L	R	I	I	A	E	N	K	I	G	V	L	R	D	L	T	T	I	I	A	E	E	G	G	N	I	T	F	A	Q	T	F	L	I	K	H	G	E	H	E	G	K	A	L	I	Y	F	E	I	E	G	G	D	F	E	K	I	L	E	R	V	K	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T												T	T													S	G	G	G	T	T	S									S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	Y	I	I	E	I	E	E	E	E	S	F	E	R	V	F	G	K	R	V	I	I	L	G	G	G	A	L	V	S	Q	V	A	I	G	A	I	S	E	A	D	R	H	N	L	R	G	E	R	I	S	V	D	T	M	P	V	V	G	E	E	E	I	A	E	A	V	K	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																																											S	S	S	S											S											G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	R	L	H	R	A	E	V	L	V	L	A	G	G	I	M	G	G	K	I	T	E	E	V	K	K	L	R	K	S	G	I	R	V	I	S	L	S	M	F	G	S	V	P	D	V	A	D	V	V	I	S	D	P	V	M	A	G	T	L	A	V	M	H	I	S	E	K	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S	T	T								S	S	B			T												T	T							S		B	S	S					S	S				S															T	T	S
	.	.	.	.	.	.	.
Sequence	F	D	L	D	R	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T