PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2cvhB_

Fold library id	PDB Header	Molecule	Title
c2cvhB_	PDB header: dna binding protein	Chain: B: PDB Molecule: dna repair and recombination protein radb;	PDBTitle: crystal structure of the radb recombinase

Links to external resources
Added to library: Tue Mar 16 14:09:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M L S T G T K S L D S L L G G G F A P G V L T Q V Y G P Y A S G K T T L A L Q T G L L S G K K V A Y V D T E G G F S P E R L V Q M A E T R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
T T S S B
T T S
S T T S S
S S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L N P E E A L S R F I L F T P S D F K E Q R R V I G S L K K T V D S N F A L V V V D S I T A H Y R A E E N R S G L I A E L S R Q L Q V L L W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
S B T T B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I A R K H N I P V I V I N Q V H F D S R T E M T K P V A E Q T L G Y R C K D I L R L D K L P K P G L R V A V L E R H R F R P E G L M A Y F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S
S S
S S
S T T
S
S S T T
S S S
T T

. . . . . . . . . 220

Sequence I T E R G I E D V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	S	T	G	T	K	S	L	D	S	L	L	G	G	G	F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	V	D	T	E	G	G	F	S	P	E	R	L	V	Q	M	A	E	T	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S								T	T	S	S	B		T	T	S							S	T	T	S	S														S							S	S	S														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	P	E	E	A	L	S	R	F	I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q	L	Q	V	L	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S																T	T										S		S	B	T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	R	K	H	N	I	P	V	I	V	I	N	Q	V	H	F	D	S	R	T	E	M	T	K	P	V	A	E	Q	T	L	G	Y	R	C	K	D	I	L	R	L	D	K	L	P	K	P	G	L	R	V	A	V	L	E	R	H	R	F	R	P	E	G	L	M	A	Y	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T									S	S	S	S			S	S				S	S		S	T	T						S									S	S	T	T										S	S	S		T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	I	T	E	R	G	I	E	D	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T