Fold library entry viewer: d1vpra1

Added to library: Tue Mar 16 13:11:06 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	K	G	F	E	A	G	D	N	K	L	G	G	A	L	N	A	K	H	V	E	K	Y	G	D	N	F	K	N	G	X	H	K	P	E	F	H	E	D	G	L	H	K	P	X	E	V	G	G	K	K	F	E	S	G	F	H	Y	L	L	E	C	H	E	L	G	G	K	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	B	S				S	S	S	S	S		B	T	T	T	T	G	G	G	G	G	G			T	T								S	S		T	T	S					T	T				S											T	S	S				T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	G	G	Y	G	G	P	L	C	E	D	P	Y	G	S	E	V	Q	A	X	T	E	K	L	L	K	E	A	D	S	D	R	T	L	C	F	N	N	F	Q	D	P	C	P	Q	L	T	K	E	Q	V	A	X	C	K	G	F	D	Y	G	D	K	T	L	K	L	P	C	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		S		B	T	T	B	S		T	T	S															T	T										T	S				B										T	T			T	T	B	T	T	S			T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	W	P	A	G	L	P	E	P	G	Y	V	P	K	T	N	P	L	H	G	R	W	I	T	V	S	G	G	Q	A	A	F	I	K	E	A	I	K	S	G	M	L	G	A	A	E	A	N	K	I	V	A	D	T	D	H	H	Q	T	G	G	X	Y	L	R	I	N	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		T	T				S					S	S		T	T									S	B											T		S														T	G	G	G	S	B		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	V	C	T	V	D	A	S	V	A	K	F	A	R	A	K	R	T	W	K	S	G	H	Y	F	Y	E	P	L	V	S	G	G	N	L	L	G	V	W	V	L	P	E	E	Y	R	K	I	G	F	F	W	E	X	E	S	G	R	C	F	R	I	E	R	R	A	F	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								T	T	T	B	S	B	S						T	T							B	T	T	S											S	S	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	P	Y	T	F	X	R	Q	A	T	E	V	G	G	K	I	S	F	V	F	Y	V	K	V	S	N	D	P	E	S	D	P	I	P	L	Q	S	R	D	Y	T	A	L	A	G	R	D	N	A	P	T	N	L	G	K	P	Y	P	T	L	A	K	D	L	D	Y	P	K	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											T	T												S				S													T	T	T		T	T		B	B	T	T	S		B					S	S		T	T	T	T			B
	.
Sequence	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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