PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1v5wa_

Fold library id	Fold	Superfamily	Family
d1v5wa_	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)

Links to external resources
Added to library: Tue Mar 16 12:58:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P G F L T A F E Y S E K R K M V F H I T T G S Q E F D K L L G G G I E S M A I T E A F G E F R T G K T Q L S H T L C V T A Q L P G A G G Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
B
S
T T S S B
S S
T T
T T T S
B T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G G K I I F I D T E N T F R P D R L R D I A D R F N V D H D A V L D N V L Y A R A Y T S E H Q M E L L D Y V A A K F H E E A G I F K L L I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
T
S T T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D S I M A L F R V D F S G R G E L A E R Q Q K L A Q M L S R L Q K I S E E Y N V A V F V T N Q M G H I L A H A S T T R I S L R K G R G E L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S G G G
G G G
T
T T T T S S S S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence I A K I Y D S P E M P E N E A T F A I T A G G I G D A K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	F	L	T	A	F	E	Y	S	E	K	R	K	M	V	F	H	I	T	T	G	S	Q	E	F	D	K	L	L	G	G	G	I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										G	G	G				B			S								T	T	S	S	B		S	S									T	T		T												T	T	S		B	T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	K	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D	R	F	N	V	D	H	D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	M	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S														T	T									T								S	T	T																S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q	K	I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R	G	E	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	G	G	G							G	G	G																								T												T	T	T	T	S	S	S								S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	I	A	K	I	Y	D	S	P	E	M	P	E	N	E	A	T	F	A	I	T	A	G	G	I	G	D	A	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S	S								T	T