Email l.a.kelley@imperial.ac.uk Description P75958 Date Thu Jan 5 12:16:27 GMT 2012 Unique Job ID 45746946a7ff18a9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ftjA_ 99.0 14 PDB header:hydrolase Chain: A: PDB Molecule:macrolide export atp-binding/permease protein PDBTitle: crystal structure of the periplasmic region of macb from2 actinobacillus actinomycetemcomitans 2 c3is6A_ 97.5 10 PDB header:transport protein Chain: A: PDB Molecule:putative permease protein, abc transporter; PDBTitle: the crystal structure of a domain of a putative permease protein from2 porphyromonas gingivalis to 2a 3 c1ciiA_ 85.2 15 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 4 c3ltiA_ 25.2 31 PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains 5 d2r6gg1 15.8 13 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 6 d1cola_ 15.0 9 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 7 d1mvfd_ 13.4 17 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 8 c3k07A_ 13.3 13 PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa 9 c2yvxD_ 12.1 14 PDB header:transport protein Chain: D: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte 10 d1g8ka1 12.0 11 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 11 d1ub4c_ 11.6 17 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 12 d2yvxa3 11.4 18 Fold:MgtE membrane domain-like Superfamily:MgtE membrane domain-like Family:MgtE membrane domain-like 13 c2jsxA_ 11.3 11 PDB header:chaperone Chain: A: PDB Molecule:protein napd; PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd 14 d1ogya1 10.5 11 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 15 d2jioa1 10.4 12 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 16 d1scjb_ 10.4 20 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors 17 c2cwbA_ 9.9 16 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 18 c2a8vA_ 9.6 21 PDB header:protein/rna Chain: A: PDB Molecule:rna binding domain of rho transcription PDBTitle: rho transcription termination factor/rna complex 19 c2l66B_ 9.6 24 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 20 c2pmwA_ 9.6 15 PDB header:hydrolase Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: the crystal structure of proprotein convertase subtilisin2 kexin type 9 (pcsk9) 21 c2w2mP_ not modelled 9.6 15 PDB header:hydrolase/receptor Chain: P: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: wt pcsk9-deltac bound to wt egf-a of ldlr 22 c2p4eP_ not modelled 9.6 15 PDB header:hydrolase Chain: P: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: crystal structure of pcsk9 23 d2vbua1 not modelled 9.5 27 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 24 c1wr1B_ not modelled 9.3 12 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 25 d2dnaa1 not modelled 9.3 12 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 26 d1o8ba2 not modelled 9.2 7 Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain 27 d1a62a2 not modelled 9.1 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 28 d1spbp_ not modelled 9.1 20 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors 29 c2w1tB_ not modelled 9.0 19 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt 30 d2bwba1 not modelled 9.0 12 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 31 c2dahA_ not modelled 9.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 32 d1vlfm1 not modelled 8.7 13 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 33 d1veja1 not modelled 8.6 12 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 34 c2dnaA_ not modelled 8.5 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 35 c3fewX_ not modelled 8.5 9 PDB header:immune system Chain: X: PDB Molecule:colicin s4; PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain 36 d1y5ia1 not modelled 8.5 17 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 37 d1h0ha1 not modelled 8.4 17 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 38 d1m0sa2 not modelled 8.3 14 Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain 39 d1uj4a2 not modelled 8.2 14 Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain 40 d2daha1 not modelled 8.2 12 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 41 c2e74E_ not modelled 8.1 8 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus 42 c1vf5E_ not modelled 8.1 8 PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 43 d2e74e1 not modelled 8.1 8 Fold:Single transmembrane helix Superfamily:PetL subunit of the cytochrome b6f complex Family:PetL subunit of the cytochrome b6f complex 44 c1vf5R_ not modelled 8.1 8 PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 45 c2e75E_ not modelled 8.1 8 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus 46 c2e76E_ not modelled 8.1 8 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 47 d1lk5a2 not modelled 8.0 14 Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain 48 c3hzqA_ not modelled 7.9 8 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state 49 d1tmoa1 not modelled 7.9 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 50 d1dv0a_ not modelled 7.9 21 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 51 d2fy9a1 not modelled 7.6 14 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 52 c2k21A_ not modelled 7.5 17 PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c 53 d1dmra1 not modelled 7.4 16 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 54 c3d31D_ not modelled 7.4 15 PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans 55 d3d31c1 not modelled 7.4 15 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 56 d2iv2x1 not modelled 7.3 11 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 57 d1yfba1 not modelled 7.2 15 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 58 d1kqfa1 not modelled 7.2 19 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 59 c2jy5A_ not modelled 7.1 8 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 60 c2kncA_ not modelled 7.1 17 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 61 c3idwA_ not modelled 7.0 44 PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 62 c2glwA_ not modelled 7.0 26 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 63 c1eu1A_ not modelled 6.9 18 PDB header:oxidoreductase Chain: A: PDB Molecule:dimethyl sulfoxide reductase; PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments. 64 c2kncB_ not modelled 6.8 6 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 65 d1eu1a1 not modelled 6.6 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 66 c2iv2X_ not modelled 6.5 11 PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli 67 c1wlfA_ not modelled 6.4 15 PDB header:protein transport Chain: A: PDB Molecule:peroxisome biogenesis factor 1; PDBTitle: structure of the n-terminal domain of pex1 aaa-atpase:2 characterization of a putative adaptor-binding domain 68 c2jpcA_ not modelled 6.2 14 PDB header:dna binding protein Chain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein 69 c1h5nC_ not modelled 6.1 18 PDB header:oxidoreductase Chain: C: PDB Molecule:dmso reductase; PDBTitle: dmso reductase modified by the presence of dms and air 70 c2ki8A_ not modelled 6.1 14 PDB header:oxidoreductase Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase, PDBTitle: solution nmr structure of tungsten formylmethanofuran2 dehydrogenase subunit d from archaeoglobus fulgidus,3 northeast structural genomics consortium target att7 71 d1e32a1 not modelled 6.0 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 72 d1q08a_ not modelled 5.9 25 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:DNA-binding N-terminal domain of transcription activators 73 c3kwmC_ not modelled 5.9 7 PDB header:isomerase Chain: C: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-isomerase a 74 c2k29A_ not modelled 5.6 19 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 75 d1oqya2 not modelled 5.5 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 76 d1ijwc_ not modelled 5.4 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 77 c2v45A_ not modelled 5.4 12 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand 78 d1m56d_ not modelled 5.4 12 Fold:Single transmembrane helix Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV Family:Bacterial aa3 type cytochrome c oxidase subunit IV 79 d1ygya3 not modelled 5.3 3 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain 80 c1lkzB_ not modelled 5.3 7 PDB header:isomerase Chain: B: PDB Molecule:ribose 5-phosphate isomerase a; PDBTitle: crystal structure of d-ribose-5-phosphate isomerase (rpia)2 from escherichia coli. 81 c2rmzA_ not modelled 5.3 14 PDB header:cell adhesion Chain: A: PDB Molecule:integrin beta-3; PDBTitle: bicelle-embedded integrin beta3 transmembrane segment 82 c2nyaF_ not modelled 5.3 18 PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli 83 c1zc1A_ not modelled 5.3 20 PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites 84 c2ro5B_ not modelled 5.3 19 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: rdc-refined solution structure of the n-terminal dna2 recognition domain of the bacillus subtilis transition-3 state regulator spovt 85 c2yujA_ not modelled 5.3 20 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 86 c2ivfA_ not modelled 5.3 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 87 d1dzfa2 not modelled 5.2 29 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 88 c1lk5C_ not modelled 5.1 14 PDB header:isomerase Chain: C: PDB Molecule:d-ribose-5-phosphate isomerase; PDBTitle: structure of the d-ribose-5-phosphate isomerase from2 pyrococcus horikoshii 89 c2kr6A_ not modelled 5.0 26 PDB header:hydrolase Chain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit 90 d1hmja_ not modelled 5.0 18 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 91 c1g8jC_ not modelled 5.0 11 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis