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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3fewX_

Fold library idPDB HeaderMoleculeTitle
c3fewX_PDB header: immune systemChain: X: PDB Molecule: colicin s4;PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain


Added to library: Tue Mar 16 12:49:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPPYVDDNGQVRITITNGLVKTPVYGVPGAGGNSDVQGGYIPENPNDEVARKWDKNNLPREIDVSIDGFK
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SS
TTS
TTGGG



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TT


SSTTSTTSGGGS
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YRVTLNDNGRAIGILRTGVRPYVGSEKAKAGIMEKINHKTPEEIYEALGFNKDESQRQEKAKQQAEDAWD
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TTS



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TT


TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RLPPNVRKFDVDVEQFHYLVVLDDYGNVLSVTRTGVRPYVGSEKAKAGIMDKVDHKTPEEIYEALGFNNE
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Known secondary structure (DSSP) TSGGG

TT
TT






TTTT


TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EPQRQNQAKKAAYDVFYSFSMNRDRIQSDVLNKAAEVISDIGNKVGDYLGDAYKSLAREIADDVKNFQGK
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Known secondary structure (DSSP) T
T
T
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TIRSYDDAMASLNKVLSNPGFKFNRADSDALANVWRSIDAQDMANKLGNISKAFKFADVVMKVEKVREKS
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T
TT





TTT
GGG
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence IEGYETGNWGPLMLEVESWVLSGIASAVALGVFSATLGAYALSLGAPAIAVGIVGILLAAVVGALLDDKF
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Known secondary structure (DSSP) S

TT



S
SS
T
 .........430...
Sequence ADALNKEIIKPAH
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Known secondary structure (DSSP) TS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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