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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2yujA_

Fold library idPDB HeaderMoleculeTitle
c2yujA_PDB header: protein bindingChain: A: PDB Molecule: ubiquitin fusion degradation 1-like;PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1


Added to library: Tue Mar 16 13:59:04 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSSGSSGIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKN
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Known secondary structure (DSSP)

S

SS




SSS

STTSSSSS

STTTTTT

TT

SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLE
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Known secondary structure (DSSP) TT


BTTB

ST

TT




SSSSS
 .........150.........160.........170.........180.........190
Sequence NALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDA
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Known secondary structure (DSSP) TT


TT
SSS
SSSSS
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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