Email l.a.kelley@imperial.ac.uk Description P0A7V0 Date Thu Jan 5 11:06:16 GMT 2012 Unique Job ID 2f820f40d1a95dca

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2uubb1 100.0 42 Fold:Flavodoxin-like Superfamily:Ribosomal protein S2 Family:Ribosomal protein S2 2 c3bbnB_ 100.0 41 PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 3 d2gy9b1 100.0 100 Fold:Flavodoxin-like Superfamily:Ribosomal protein S2 Family:Ribosomal protein S2 4 c3bchA_ 100.0 26 PDB header:cell adhesion, ribosomal protein Chain: A: PDB Molecule:40s ribosomal protein sa; PDBTitle: crystal structure of the human laminin receptor precursor 5 c3iz6A_ 100.0 28 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 6 d1vi6a_ 100.0 31 Fold:Flavodoxin-like Superfamily:Ribosomal protein S2 Family:Ribosomal protein S2 7 c2xznB_ 100.0 29 PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 8 c3izbA_ 100.0 27 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 9 c2zkqb_ 100.0 24 PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 10 c1s1hB_ 100.0 29 PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 11 d1x94a_ 97.6 19 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 12 d1tk9a_ 97.1 21 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 13 c2x3yA_ 97.1 17 PDB header:isomerase Chain: A: PDB Molecule:phosphoheptose isomerase; PDBTitle: crystal structure of gmha from burkholderia pseudomallei 14 c3shoA_ 95.8 19 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) 15 d1x92a_ 95.5 18 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 16 c1nriA_ 94.5 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein hi0754; PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae 17 d1nria_ 94.5 16 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 18 d1m3sa_ 93.6 19 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 19 c2yvaB_ 93.1 19 PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa 20 c2amlB_ 92.5 13 PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution 21 d1vima_ not modelled 92.1 19 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 22 c3knzA_ not modelled 90.1 18 PDB header:sugar binding protein Chain: A: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution 23 c3trjC_ not modelled 89.6 18 PDB header:isomerase Chain: C: PDB Molecule:phosphoheptose isomerase; PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis 24 c3fxaA_ not modelled 86.2 17 PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution 25 c2a3nA_ not modelled 85.6 17 PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution 26 c2xhzC_ not modelled 85.4 16 PDB header:isomerase Chain: C: PDB Molecule:arabinose 5-phosphate isomerase; PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography 27 c3c65A_ not modelled 83.7 12 PDB header:hydrolase Chain: A: PDB Molecule:uvrabc system protein c; PDBTitle: crystal structure of bacillus stearothermophilus uvrc 5'2 endonuclease domain 28 c3cvjB_ not modelled 78.6 14 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoheptose isomerase; PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution 29 c2nrrA_ not modelled 75.1 21 PDB header:hydrolase Chain: A: PDB Molecule:uvrabc system protein c; PDBTitle: crystal structure of the c-terminal rnaseh endonuclase2 domain of uvrc 30 d1jeoa_ not modelled 74.4 24 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 31 c3hgtA_ not modelled 73.8 17 PDB header:transcription Chain: A: PDB Molecule:hda1 complex subunit 3; PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex 32 d1j5xa_ not modelled 72.0 10 Fold:SIS domain Superfamily:SIS domain Family:double-SIS domain 33 c3etnD_ not modelled 71.5 16 PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution 34 c3g68A_ not modelled 69.4 13 PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution 35 d1kzyc2 not modelled 66.5 20 Fold:BRCT domain Superfamily:BRCT domain Family:53BP1 36 c3cf4A_ not modelled 61.1 21 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 37 c3ga2A_ not modelled 60.3 29 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease_v (bsu36170) from2 bacillus subtilis, northeast structural genomics3 consortium target sr624 38 d1pjqa1 not modelled 59.4 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Siroheme synthase N-terminal domain-like 39 c2r7aC_ not modelled 57.9 11 PDB header:transport protein Chain: C: PDB Molecule:bacterial heme binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein2 from shigella dysenteriae 40 d2f9ya1 not modelled 55.5 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 41 c2nrzB_ not modelled 54.9 22 PDB header:hydrolase Chain: B: PDB Molecule:uvrabc system protein c; PDBTitle: crystal structure of the c-terminal half of uvrc bound to2 its catalytic divalent cation 42 c2f9iC_ not modelled 54.7 33 PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 43 c2w36B_ not modelled 50.4 21 PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: structures of endonuclease v with dna reveal initiation of2 deaminated adenine repair 44 d1l7ba_ not modelled 49.3 21 Fold:BRCT domain Superfamily:BRCT domain Family:DNA ligase 45 d1pixa3 not modelled 48.4 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 46 c3gocB_ not modelled 44.2 19 PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease v (sav1684) from streptomyces2 avermitilis. northeast structural genomics consortium target svr196 47 c2zj3A_ not modelled 44.0 17 PDB header:transferase Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate PDBTitle: isomerase domain of human glucose:fructose-6-phosphate2 amidotransferase 48 c1pixB_ not modelled 43.1 23 PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase 49 c1xnwD_ not modelled 42.3 20 PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i 50 d1j6ua1 not modelled 42.0 18 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 51 c2vpiA_ not modelled 40.8 21 PDB header:ligase Chain: A: PDB Molecule:gmp synthase; PDBTitle: human gmp synthetase - glutaminase domain 52 d1p3da1 not modelled 40.6 18 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 53 c3n6rF_ not modelled 40.0 15 PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) 54 d1l5xa_ not modelled 39.8 30 Fold:SurE-like Superfamily:SurE-like Family:SurE-like 55 c3glmD_ not modelled 36.6 21 PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa 56 d1euca1 not modelled 34.8 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 57 d1x9ia_ not modelled 34.7 16 Fold:SIS domain Superfamily:SIS domain Family:double-SIS domain 58 d2gv8a2 not modelled 34.4 15 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 59 c1keeH_ not modelled 34.1 37 PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin 60 d1xnya1 not modelled 33.8 33 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 61 d2jfga1 not modelled 33.1 18 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 62 c1vrgE_ not modelled 33.0 28 PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution 63 d1k9vf_ not modelled 32.8 17 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 64 d1s3la_ not modelled 32.7 26 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 65 c1s3mA_ not modelled 32.7 26 PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase 66 d1on3a1 not modelled 32.1 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 67 d1o6ca_ not modelled 31.1 16 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase 68 c3tqiB_ not modelled 30.8 18 PDB header:ligase Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: structure of the gmp synthase (guaa) from coxiella burnetii 69 c3qk7C_ not modelled 30.5 15 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 70 d1xnya2 not modelled 30.4 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 71 c2puwA_ not modelled 29.8 14 PDB header:transferase Chain: A: PDB Molecule:isomerase domain of glutamine-fructose-6-phosphate PDBTitle: the crystal structure of isomerase domain of glucosamine-6-phosphate2 synthase from candida albicans 72 c3u9rB_ not modelled 29.5 26 PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit 73 c3euaD_ not modelled 29.4 12 PDB header:isomerase Chain: D: PDB Molecule:putative fructose-aminoacid-6-phosphate deglycase; PDBTitle: crystal structure of a putative phosphosugar isomerase (bsu32610) from2 bacillus subtilis at 1.90 a resolution 74 d1vrga1 not modelled 29.2 39 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 75 d1b74a1 not modelled 29.0 22 Fold:ATC-like Superfamily:Aspartate/glutamate racemase Family:Aspartate/glutamate racemase 76 d2a7sa2 not modelled 28.6 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 77 c3bblA_ not modelled 28.4 8 PDB header:regulatory protein Chain: A: PDB Molecule:regulatory protein of laci family; PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans 78 d2f9yb1 not modelled 26.9 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 79 c2f9yB_ not modelled 26.9 13 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli 80 d2d59a1 not modelled 26.8 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 81 d2a7sa1 not modelled 26.6 25 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 82 d1ir6a_ not modelled 26.5 25 Fold:DHH phosphoesterases Superfamily:DHH phosphoesterases Family:Exonuclease RecJ 83 c1ir6A_ not modelled 26.5 25 PDB header:hydrolase Chain: A: PDB Molecule:exonuclease recj; PDBTitle: crystal structure of exonuclease recj bound to manganese 84 d1a9xa4 not modelled 26.4 19 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 85 c1x0uB_ not modelled 26.3 32 PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii 86 d1vrga2 not modelled 26.1 32 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 87 c3cs3A_ not modelled 26.0 13 PDB header:transcription regulator Chain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis 88 c2f9iD_ not modelled 26.0 15 PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 89 c1on3E_ not modelled 26.0 15 PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) 90 c3o1hB_ not modelled 25.2 9 PDB header:signaling protein Chain: B: PDB Molecule:periplasmic protein tort; PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao 91 c3fijD_ not modelled 24.9 37 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 92 c2a7sD_ not modelled 24.7 21 PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis 93 d1pixa2 not modelled 24.4 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 94 c1uheA_ not modelled 24.3 37 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase alpha chain; PDBTitle: crystal structure of aspartate decarboxylase, isoaspargine complex 95 c1pjtB_ not modelled 24.3 15 PDB header:transferase/oxidoreductase/lyase Chain: B: PDB Molecule:siroheme synthase; PDBTitle: the structure of the ser128ala point-mutant variant of cysg,2 the multifunctional3 methyltransferase/dehydrogenase/ferrochelatase for4 siroheme synthesis 96 d1on3a2 not modelled 24.1 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 97 c3r74B_ not modelled 22.0 21 PDB header:lyase, biosynthetic protein Chain: B: PDB Molecule:anthranilate/para-aminobenzoate synthases component i; PDBTitle: crystal structure of 2-amino-2-desoxyisochorismate synthase (adic)2 synthase phze from burkholderia lata 383 98 d1ka9h_ not modelled 21.8 21 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 99 d1f0ka_ not modelled 21.6 16 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Peptidoglycan biosynthesis glycosyltransferase MurG 100 d1oi7a1 not modelled 21.3 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 101 c2v4uA_ not modelled 20.9 26 PDB header:ligase Chain: A: PDB Molecule:ctp synthase 2; PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine 102 c3fkjA_ not modelled 20.4 17 PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution