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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3hgtA_

Fold library idPDB HeaderMoleculeTitle
c3hgtA_PDB header: transcriptionChain: A: PDB Molecule: hda1 complex subunit 3;PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex


Added to library: Sat Aug 28 16:35:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSGDYWLPTTMSLYQKELTDQIVSLHYSDILRYFETSHYKEDVILESMKTMCLNGSLVATHPYLLIDHYM
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Known secondary structure (DSSP)

S


TTTTT


GGGT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PKSLITRDVPAHLAENSGKFSVLRDLINLVQEYETETAIVCRPGRTMDLLEALLLGNKVHIKRYDGHSID
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Known secondary structure (DSSP)
S
S
STTT
TTS

STTTSS
SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence FSCTVHLFSSEGINFTKYPIKSKARFDMLICLDTTVDTSQKDIQYLLQYKAPIVRLVAINSIDHCRLFFG
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Known secondary structure (DSSP)
SSS


TTTS




S

S
STT

TTS




TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KKFDKNSREYLENVTAAMVILRDRLGTLPPDLRPIYSQKLHYLVEWLENPTVPWPLPDIYPLKQYTSMDV
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Known secondary structure (DSSP) T
TT
GGGSTT


TTTTTTGGG
TTS

SS









 ......
Sequence ERSLLT
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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