Fold library entry viewer: c3cf4A_

Added to library: Tue Mar 16 14:00:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	G	P	T	L	F	P	G	L	E	G	Y	R	D	D	W	N	F	K	L	L	D	R	Y	E	P	V	I	T	P	M	C	D	Q	C	C	Y	C	T	Y	G	P	C	D	L	S	G	N	K	R	G	A	C	G	I	D	M	K	G	H	N	G	R	E	F	F	L	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S			T	T	T	T	T	T	T	T								S							S	S	S				S	S	T	T						T	T	T		B		T	T	S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	T	G	T	A	C	H	A	A	H	G	R	H	L	L	D	H	L	I	E	K	Y	G	E	D	L	P	L	T	L	G	Q	S	N	V	L	T	P	N	I	T	I	S	T	G	L	S	P	K	T	L	G	E	V	K	P	A	M	E	Y	V	E	E	Q	L	T	Q	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T		B				S	S		S	S															B	S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	H	A	G	Q	E	S	A	E	I	D	Y	D	S	K	A	L	F	S	G	S	L	D	H	V	G	M	E	I	S	D	I	V	Q	V	A	A	Y	D	F	P	K	A	D	P	E	A	P	L	V	E	I	G	M	G	T	I	D	K	S	K	P	F	L	C	V	I	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T	S																																	T	T				S		T	T							S	G	G	G	S		T	T	S							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	V	A	G	V	T	Y	M	M	D	Y	M	E	D	N	N	L	T	D	K	M	E	I	A	G	L	C	C	T	A	I	D	L	T	R	Y	K	E	A	D	R	R	P	P	Y	A	K	V	I	G	S	M	S	K	E	L	K	V	I	R	S	G	M	P	D	V	I	V	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T		T	T	T	S						S							T	T	T	T		T	T						S					S	G	G	G								T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	Q	C	V	R	G	D	I	V	P	E	A	Q	K	L	K	I	P	V	I	A	S	N	P	K	I	M	Y	G	L	P	N	R	T	D	A	D	V	D	E	T	M	E	E	L	K	S	G	K	I	P	G	C	V	M	L	D	Y	D	K	L	G	E	L	C	V	R	L	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S			T	T								T	T							S	T	T			T	T			B		T	T	S											T	T	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	M	A	P	I	R	D	A	A	G	I	T	A	L	P	T	D	E	E	L	V	N	M	V	A	K	C	A	D	C	G	A	C	L	L	A	C	P	E	E	I	D	I	P	E	A	M	G	F	A	K	K	G	D	F	S	Y	F	E	E	I	H	D	T	C	I	G	C	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T				S																								T	T													T	T		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	C	E	Q	V	C	K	K	E	I	P	I	L	N	V	I	E	K	I	A	Q	K	Q	I	A	E	E	K	G	L	M	R	A	G	R	G	Q	V	S	D	A	E	I	R	A	E	G	L	N	L	V	M	G	T	T	P	G	I	I	A	I	I	G	C	P	N	Y	A	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T												T						T											S																S	S	S								S					S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	D	V	Y	Y	I	A	E	E	F	L	K	R	N	F	I	V	V	T	T	G	C	G	A	M	D	I	G	M	F	K	D	A	D	G	K	T	L	Y	E	R	F	P	G	G	F	Q	C	G	G	L	A	N	I	G	S	C	V	S	N	A	H	I	T	G	A	A	E	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T														T	S				T	T	S							S			S	S	S	T	T							S	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	A	I	F	A	Q	R	T	L	E	G	N	L	A	E	I	G	D	Y	I	L	N	R	V	G	A	C	G	L	A	W	G	A	F	S	Q	K	A	S	S	I	G	T	G	C	N	I	F	G	I	P	A	V	L	G	P	H	S	S	K	Y	R	R	A	L	I	A	K	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S					T	T																				T	T			S													T	T							G	G	G	G	G	G	S							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	E	D	K	W	K	V	Y	D	A	R	N	G	Q	E	M	P	I	P	P	A	P	E	F	L	L	T	T	A	E	T	W	Q	E	A	I	P	M	M	A	K	A	C	I	R	P	S	D	N	S	M	G	R	A	I	K	L	T	H	W	M	E	L	H	K	K	Y	L	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S					T	T	T										S	S							S	S												T			T	T																					T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Sequence	K	E	P	E	D	W	W	K	F	V	R	T	E	A	D	L	P	L	A	T	R	E	A	L	L	K	E	L	E	K	E	H	G	W	E	I	D	W	K	R	K	K	I	I	S	G	P	K	I	K	F	D	V	S	A	Q	P	T	N	L	K	R	L	C	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	G	G	G	G		S	S	G	G	G	S		S	T	T																		T	T	T	T							S	S				T	T					S		G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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