Fold library entry viewer: c1pixB_

Added to library: Tue Mar 16 14:28:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	F	Y	S	M	P	R	Y	F	Q	N	M	P	Q	V	G	K	P	L	K	K	A	D	A	A	N	E	E	Q	L	K	K	I	E	E	E	I	H	Q	L	I	K	E	A	Q	E	A	G	K	A	D	A	D	V	N	K	R	G	E	L	T	A	L	Q	R	I	E	K	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						S	S			B						S	S																											S	S								T	T												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	P	G	S	W	R	P	L	N	T	L	F	N	P	Q	G	N	K	N	G	S	V	A	I	V	K	G	L	G	R	V	N	G	K	W	C	V	V	V	A	S	D	N	K	K	L	A	G	A	W	V	P	G	Q	A	E	C	L	L	R	A	S	D	T	A	K	T	L	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						S	T	T			T	T			T	T	S			S									T	T										T	T	S	G	G	G		B		T	T																T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	V	Y	V	L	N	C	S	G	V	K	F	D	E	Q	E	K	V	Y	P	N	R	R	G	G	G	T	P	F	F	R	N	A	E	L	N	Q	L	G	I	P	V	I	V	G	I	Y	G	T	N	P	A	G	G	G	Y	H	S	I	S	P	T	V	I	I	A	H	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B		G	G	G					S	S	S	T	T	S	T	T												T	T									S				T								S	S	S						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	N	M	A	V	G	G	A	G	I	M	G	G	M	N	P	K	G	H	V	D	L	E	Y	A	N	E	I	A	D	M	V	D	R	T	G	K	T	E	P	P	G	A	V	D	I	H	Y	T	E	T	G	F	M	R	E	V	Y	A	S	E	E	G	V	L	E	G	I	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S				T	T	T	T					S																			S				S	S	B					T	T	T	S			S	S				S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	V	G	M	L	P	K	Y	D	P	E	F	F	R	V	D	D	P	K	A	P	A	F	P	A	D	D	L	Y	S	M	V	P	L	N	D	K	R	A	Y	D	I	Y	N	V	I	A	R	L	F	D	N	S	E	L	H	E	Y	K	K	G	Y	G	P	E	M	V	T	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S					G	G	G	G	B	S	S						S	S		G	G	G					S		S	S	T	T											T	T	S	G	G	G	B				S	S	T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	K	V	N	G	L	L	V	G	V	V	A	N	V	Q	G	L	L	M	N	Y	P	E	Y	K	A	A	G	S	V	G	I	G	G	K	L	Y	R	Q	G	L	V	K	M	N	E	F	V	T	L	C	A	R	D	R	L	P	I	V	W	I	Q	D	T	T	G	I	D	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											S			T	T			T	T	S		T	T					T	T																				T	T															S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	D	A	E	K	A	E	L	L	G	L	G	Q	S	L	I	Y	S	I	Q	T	S	H	I	P	Q	F	E	I	T	L	R	K	G	T	A	A	A	H	Y	V	L	G	G	P	Q	G	N	D	T	N	A	F	S	I	G	T	A	A	T	E	I	A	V	M	N	G	E	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T														T											S				T	T					T	T		T	T		T	T	T								T	T					S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	T	A	M	Y	S	R	R	L	A	K	D	R	K	A	G	K	D	L	Q	P	T	I	D	K	M	N	N	L	I	Q	A	F	Y	T	K	S	R	P	K	V	C	A	E	L	G	L	V	D	E	I	V	D	M	N	K	I	R	G	Y	V	E	A	F	T	E	A	A	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T																				T	T	S								T	S	S	S					G	G	G													T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Sequence	N	P	E	S	I	C	P	F	H	Q	M	I	L	P	R	A	I	R	E	F	E	T	F	V	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S					G	G	G		S

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PDB structure

FASTA sequence

Hidden Markov model

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