Email l.a.kelley@imperial.ac.uk Description P24205 Date Thu Jan 5 11:41:14 GMT 2012 Unique Job ID 0755821a9535454d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1ltxA_ 64.7 14 PDB header:transferase/protein binding Chain: A: PDB Molecule:rab geranylgeranyltransferase alpha subunit; PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid 2 d1j7ja_ 55.9 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 3 d1kl7a_ 55.3 6 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 4 d1g9sa_ 49.2 12 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 5 c2j5bA_ 44.6 11 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol 6 d1a3ca_ 42.3 10 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 7 d2igba1 36.0 15 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 8 c1xuzA_ 34.3 10 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 9 c2pjuD_ 33.9 11 PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr 10 c1yfzA_ 33.9 7 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: novel imp binding in feedback inhibition of hypoxanthine-guanine2 phosphoribosyltransferase from thermoanaerobacter tengcongensis 11 d1yfza1 33.9 7 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 12 c3efhB_ 32.2 8 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 13 d1nkta4 31.3 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 14 c3o7mD_ 31.3 7 PDB header:transferase Chain: D: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 1.98 angstrom resolution crystal structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-2) from bacillus anthracis str. 'ames3 ancestor' 15 d2zdra2 29.0 11 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 16 d1ufra_ 28.8 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 17 c3lubE_ 28.4 23 PDB header:hydrolase Chain: E: PDB Molecule:putative creatinine amidohydrolase; PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution 18 d1v7za_ 26.8 17 Fold:Creatininase Superfamily:Creatininase Family:Creatininase 19 d1w30a_ 25.9 15 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 20 c2q5cA_ 24.3 9 PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum 21 c3cwcB_ not modelled 24.1 8 PDB header:transferase Chain: B: PDB Molecule:putative glycerate kinase 2; PDBTitle: crystal structure of putative glycerate kinase 2 from salmonella2 typhimurium lt2 22 c3no4A_ not modelled 24.0 12 PDB header:hydrolase Chain: A: PDB Molecule:creatinine amidohydrolase; PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution 23 d1d8da_ not modelled 22.4 14 Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase 24 d1hgxa_ not modelled 22.4 11 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 25 d1pzma_ not modelled 21.0 11 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 26 d1l1qa_ not modelled 19.1 8 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 27 d1wgla_ not modelled 18.6 11 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 28 c2ps3A_ not modelled 18.4 12 PDB header:metal transport Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: structure and metal binding properties of znua, a2 periplasmic zinc transporter from escherichia coli 29 d1a9xb1 not modelled 17.6 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Carbamoyl phosphate synthetase, small subunit N-terminal domain Family:Carbamoyl phosphate synthetase, small subunit N-terminal domain 30 c2dhyA_ not modelled 17.6 10 PDB header:immune system Chain: A: PDB Molecule:cue domain-containing protein 1; PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1) 31 c2ov3A_ not modelled 17.3 17 PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound 32 d1o60a_ not modelled 17.1 11 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 33 c3kb8A_ not modelled 17.0 9 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 2.09 angstrom resolution structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-1) from bacillus anthracis str. 'ames3 ancestor' in complex with gmp 34 d1hrua_ not modelled 16.4 20 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 35 c2ywtA_ not modelled 16.1 7 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: crystal structure of hypoxanthine-guanine2 phosphoribosyltransferase with gmp from thermus3 thermophilus hb8 36 d1d7ya2 not modelled 15.7 8 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 37 c2o1eB_ not modelled 15.4 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583 38 d1jcua_ not modelled 15.3 21 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 39 d2h6fa1 not modelled 15.3 14 Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase 40 d1cv8a_ not modelled 15.2 11 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 41 d1gm5a4 not modelled 15.2 10 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 42 c3f6tA_ not modelled 15.1 15 PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution 43 c3dl8B_ not modelled 14.9 11 PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 44 c2cycB_ not modelled 14.3 7 PDB header:ligase Chain: B: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with l-tyrosine2 from pyrococcus horikoshii 45 d2obba1 not modelled 14.1 12 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 46 d1k7ja_ not modelled 13.9 25 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 47 c1keeH_ not modelled 13.5 15 PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin 48 c3mioA_ not modelled 13.3 16 PDB header:lyase Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase; PDBTitle: crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase2 domain from mycobacterium tuberculosis at ph 6.00 49 d1tksa_ not modelled 13.3 14 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 50 c1tnoI_ not modelled 13.2 12 PDB header:transferase Chain: I: PDB Molecule:geranylgeranyltransferase type i alpha subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a kkksktkcvim peptide derived from k-3 ras4b 51 c2advB_ not modelled 13.0 23 PDB header:hydrolase Chain: B: PDB Molecule:glutaryl 7- aminocephalosporanic acid acylase; PDBTitle: crystal structures of glutaryl 7-aminocephalosporanic acid acylase:2 mutational study of activation mechanism 52 d1tuwa_ not modelled 12.9 22 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Polyketide synthesis cyclase 53 d1p3qq_ not modelled 12.7 17 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 54 d1snna_ not modelled 12.5 13 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 55 d1xdfa1 not modelled 12.5 18 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 56 c3m8yC_ not modelled 12.4 11 PDB header:isomerase Chain: C: PDB Molecule:phosphopentomutase; PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation 57 c1tf2A_ not modelled 12.4 11 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of seca:adp in an open conformation from2 bacillus subtilis 58 c1fcuA_ not modelled 12.4 11 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase 59 d1mn3a_ not modelled 12.2 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 60 d1fl2a2 not modelled 12.1 9 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 61 d1fcqa_ not modelled 11.8 11 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Bee venom hyaluronidase 62 c1pzmB_ not modelled 11.7 11 PDB header:transferase Chain: B: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: crystal structure of hgprt-ase from leishmania tarentolae in complex2 with gmp 63 d1tc1a_ not modelled 11.5 9 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 64 d2pjua1 not modelled 11.4 11 Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like 65 d1pyfa_ not modelled 11.2 8 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 66 d1iuqa_ not modelled 11.1 22 Fold:Glycerol-3-phosphate (1)-acyltransferase Superfamily:Glycerol-3-phosphate (1)-acyltransferase Family:Glycerol-3-phosphate (1)-acyltransferase 67 d1g2qa_ not modelled 10.9 10 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 68 c2h3oA_ not modelled 10.7 9 PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices 69 d3pmga2 not modelled 10.5 8 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 70 c2ns6A_ not modelled 10.3 15 PDB header:hydrolase Chain: A: PDB Molecule:mobilization protein a; PDBTitle: crystal structure of the minimal relaxase domain of moba2 from plasmid r1162 71 d1ikpa3 not modelled 10.3 27 Fold:Toxins' membrane translocation domains Superfamily:Exotoxin A, middle domain Family:Exotoxin A, middle domain 72 d1v71a1 not modelled 9.9 11 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 73 c2pe4A_ not modelled 9.7 21 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis 74 d2pw6a1 not modelled 9.7 7 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 75 d1xrsa_ not modelled 9.6 19 Fold:TIM beta/alpha-barrel Superfamily:Cobalamin (vitamin B12)-dependent enzymes Family:D-lysine 5,6-aminomutase alpha subunit, KamD 76 c3ktsA_ not modelled 9.6 12 PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 77 d1iyjb4 not modelled 9.5 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 78 c3iraA_ not modelled 9.3 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: the crystal structure of one domain of the conserved protein from2 methanosarcina mazei go1 79 d1nj1a2 not modelled 9.1 13 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 80 d2aeea1 not modelled 8.8 4 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 81 c2lc0A_ not modelled 8.8 10 PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure 82 d2pi8a1 not modelled 8.7 11 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:MLTA-like 83 d1vzya2 not modelled 8.6 17 Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like 84 d1mkya3 not modelled 8.6 6 Fold:Alpha-lytic protease prodomain-like Superfamily:Probable GTPase Der, C-terminal domain Family:Probable GTPase Der, C-terminal domain 85 d1k4ia_ not modelled 8.5 16 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 86 c2qx5B_ not modelled 8.2 29 PDB header:transport protein Chain: B: PDB Molecule:nucleoporin nic96; PDBTitle: structure of nucleoporin nic96 87 c3dezA_ not modelled 8.2 8 PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: crystal structure of orotate phosphoribosyltransferase from2 streptococcus mutans 88 c2eqaA_ not modelled 8.0 21 PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii 89 c2jcyA_ not modelled 7.9 14 PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis 90 c3koxA_ not modelled 7.8 16 PDB header:metal binding protein Chain: A: PDB Molecule:d-ornithine aminomutase e component; PDBTitle: crystal structure of ornithine 4,5 aminomutase in complex with 2,4-2 diaminobutyrate (anaerobic) 91 c3cx3A_ not modelled 7.8 11 PDB header:metal binding protein Chain: A: PDB Molecule:lipoprotein; PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein 92 c3khsB_ not modelled 7.7 11 PDB header:hydrolase Chain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase 93 c1r6uB_ not modelled 7.6 8 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tryptophanyl-trna2 synthetase with cytokine activity 94 d1nj8a2 not modelled 7.6 17 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 95 c2bnlE_ not modelled 7.5 12 PDB header:stress-response Chain: E: PDB Molecule:modulator protein rsbr; PDBTitle: the structure of the n-terminal domain of rsbr 96 c3g8rA_ not modelled 7.4 12 PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 97 c3l6gA_ not modelled 7.4 12 PDB header:glycine betaine-binding protein Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding PDBTitle: crystal structure of lactococcal opuac in its open conformation 98 d1p17b_ not modelled 7.4 9 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 99 c3ie5A_ not modelled 7.3 20 PDB header:plant protein, biosynthetic protein Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1; PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis