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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3f6tA_

Fold library idPDB HeaderMoleculeTitle
c3f6tA_PDB header: transferaseChain: A: PDB Molecule: aspartate aminotransferase;PDBTitle: crystal structure of aspartate aminotransferase (e.c.2 2.6.1.1) (yp_194538.1) from lactobacillus acidophilus ncfm3 at 2.15 a resolution


Added to library: Tue Mar 16 13:11:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FEISRKXLALAQKNEKSNIFLNAGRGNPNWIQTLARLAFVRLVQFGVTESKLTINNGIXAGYINTDGIRE
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Known secondary structure (DSSP)




GGGT




S



TTT
TT




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLFAFLDPDKNDEDKFLIDAVNYCHTELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELS
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Known secondary structure (DSSP)

TTT
TT


T
S

SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence YKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSY
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Known secondary structure (DSSP) TTT


GGGTTSS
TT
SS

TSGGGGGS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYGAFVPNFK
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Known secondary structure (DSSP) TTTTS
S
TTSS
TTT
B



TT

TTGGGSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence SIYSVVPYNTXLVYSYSLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKXKFID
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Known secondary structure (DSSP)
SGGG



S
GGG
SS
TS
TT
S
GGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence RLCADSRSIGLYHTAGLSTPQQIXEALFSXTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAXQAPKDE
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Known secondary structure (DSSP) TTTTTGGG
S

TT
BGGGTB
T




 .........430.........440.........450.........460.........470.........480.........490
Sequence TDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANL
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Known secondary structure (DSSP) STTB

S


TTSSS
TT
SSTTSSSS
 .........500.........510....
Sequence PTEDYALIGKQVLELLKEYYEEFK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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