PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ie5A_

Fold library id	PDB Header	Molecule	Title
c3ie5A_	PDB header: plant protein, biosynthetic protein	Chain: A: PDB Molecule: phenolic oxidative coupling protein hyp-1;	PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis

Links to external resources
Added to library: Sat Aug 28 17:47:10 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T M A A Y T I V K E E E S P I A P H R L F K A L V L E R H Q V L V K A Q P H V F K S G E I I E G D G G V G T V T K I T F V D G H P L T Y M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T T
T T T S S S S T T
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H K F D E I D A A N F Y C K Y T L F E G D V L R D N I E K V V Y E V K L E A V G G G S K G K I T V T Y H P K P G C T V N E E E V K I G E K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T G G G T T T T T
T T

. . . . . . . . . 150 . . . . . . . . . 160

Sequence A Y E F Y K Q V E E Y L A A N P E V F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	M	A	A	Y	T	I	V	K	E	E	E	S	P	I	A	P	H	R	L	F	K	A	L	V	L	E	R	H	Q	V	L	V	K	A	Q	P	H	V	F	K	S	G	E	I	I	E	G	D	G	G	V	G	T	V	T	K	I	T	F	V	D	G	H	P	L	T	Y	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											S	S										T	T	T										T	T	T									S	S	S	S	T	T									T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	K	F	D	E	I	D	A	A	N	F	Y	C	K	Y	T	L	F	E	G	D	V	L	R	D	N	I	E	K	V	V	Y	E	V	K	L	E	A	V	G	G	G	S	K	G	K	I	T	V	T	Y	H	P	K	P	G	C	T	V	N	E	E	E	V	K	I	G	E	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	T										G	G	G	T	T	T														T	T														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Sequence	A	Y	E	F	Y	K	Q	V	E	E	Y	L	A	A	N	P	E	V	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	T