Fold library entry viewer: c3dl8B_

Added to library: Tue Mar 16 12:41:47 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	K	M	F	D	P	T	K	R	T	L	N	R	Y	E	K	I	A	N	D	I	D	A	I	R	G	D	Y	E	N	L	S	D	D	A	L	K	H	K	T	I	E	F	K	E	R	L	E	K	G	A	T	T	D	D	L	L	V	E	A	F	A	V	V	R	E	A	S	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																										T	T	T		S																S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	T	G	M	F	P	F	K	V	Q	L	M	G	G	V	A	L	H	D	G	N	I	A	E	M	K	T	G	E	G	K	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	K	G	V	H	V	V	T	V	N	E	Y	L	A	S	R	D	A	E	Q	M	G	K	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					S	T	T										S	S					S	S	S	S		T													T	T	S	S							S												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	F	L	G	L	T	V	G	L	N	L	N	S	M	S	K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	L	Y	K	E	Q	M	V	Q	R	P	L	H	F	A	V	I	D	E	V	D	S	I	L	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					B			S	S			S	S								S	S																T	T	T		S		S															T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	A	R	T	P	L	I	I	S	G	Q	A	A	K	S	T	K	L	Y	V	Q	A	N	A	F	V	R	T	L	K	A	E	K	D	Y	T	Y	D	I	K	T	K	A	V	Q	L	T	E	E	G	M	T	K	A	E	K	A	F	G	I	D	N	L	F	D	V	K	H	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				B							S	S																		S		S	T	T				S	S	S															S	S				S				T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	N	H	H	I	N	Q	A	L	K	A	H	V	A	M	Q	K	D	V	D	Y	V	V	E	D	G	Q	V	V	I	V	D	S	F	T	G	R	L	M	K	G	R	R	Y	S	E	G	L	H	Q	A	I	E	A	K	E	G	L	E	I	Q	N	E	S	M	T	L	A	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		T	T	T	S		B		T	T	T			B		B		T	T	T		S		B		S			S		T	T										S										B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	F	Q	N	Y	F	R	M	Y	E	K	L	A	G	M	T	G	T	A	K	T	E	E	E	E	F	R	N	I	Y	N	M	Q	V	V	T	I	P	T	N	R	P	V	V	R	D	D	R	P	D	L	I	Y	R	T	M	E	G	K	F	K	A	V	A	E	D	V	A	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S						S				S									T	T										S	S	T	T		S										S	S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	M	T	G	Q	P	V	L	V	G	T	V	A	V	E	T	S	E	L	I	S	K	L	L	K	N	K	G	I	P	H	Q	V	L	N	A	K	N	H	E	R	E	A	Q	I	I	E	E	A	G	Q	K	G	A	V	T	I	A	T	N	M	A	G	R	G	T	D	I	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T								S	S															T							S	S	S												S	S	S	S	S							T	T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	E	G	V	K	E	L	G	G	L	A	V	V	G	T	E	R	H	E	S	R	R	I	D	N	Q	L	R	G	R	S	G	R	Q	G	D	P	G	I	T	Q	F	Y	L	S	M	E	D	E	L	M	R	R	F	G	A	E	R	T	M	A	M	L	D	R	F	G	M	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	G	G	G	S	S	S						S	S			S	S										T	S		S	S	S											T	T	S	S					S	S										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	T	P	I	Q	S	K	M	V	S	R	A	V	E	S	S	Q	K	R	V	E	G	N	N	F	D	S	R	K	Q	L	L	Q	Y	D	D	V	L	R	Q	Q	R	E	V	I	Y	K	Q	R	F	E	V	I	D	S	E	N	L	R	E	I	V	E	N	M	I	K	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		B			S	S																																																S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	R	A	I	A	A	Y	T	P	R	E	E	L	P	E	E	W	K	L	D	G	L	V	D	L	I	N	T	T	Y	L	D	E	G	A	L	E	K	S	D	I	F	G	K	E	P	D	E	M	L	E	L	I	M	D	R	I	I	T	K	Y	N	E	K	E	E	Q	F	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S		S			S	S	S											T			S	S		S	S	S	S								S																					T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	Q	M	R	E	F	E	K	V	I	V	L	R	A	V	D	S	K	W	M	D	H	I	D	A	M	D	Q	L	R	Q	G	I	H	L	R	A	Y	A	Q	T	N	P	L	R	E	Y	Q	M	E	G	F	A	M	F	E	H	M	I	E	S	I	E	D	E	V	A	K	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T	S	S	S			S	S
	.	.	.
Sequence	M	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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