Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1xrsa_

Fold library idFoldSuperfamilyFamily
d1xrsa_TIM beta/alpha-barrelCobalamin (vitamin B12)-dependent enzymesD-lysine 5,6-aminomutase alpha subunit, KamD


Added to library: Tue Mar 16 12:34:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MESKLNLDFNLVEKARAKAKAIAIDTQEFIEKHTTVTVERAVCRLLGIDGVDTDEVPLPNIVVDHIKENN
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)


SS


TTT

SB
TTS
BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLNLGAAMYIANAVLNTGKTPQEIAQAISAGELDLTKLPMKDLFEVKTKALSMAKETVEKIKNNRSIRES
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
TTT
TT


T


TTTS



 .........150.........160.........170.........180.........190.........200.........210
Sequence RFEEYGDKSGPLLYVIVATGNIYEDITQAVAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQ
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)


SS


S
TT
S


TTGGG
SS


S

S

TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence ENFRLMREALDKVGAEVGKYIRLCNYCSGLCMPEIAAMGAIERLDVMLNDALYGILFRDINMQRTMIDQN
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TS



STTT
S

SS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence FSRIINGFAGVIINTGEDNYLTTADAFEEAHTVLASQFINEQFALLAGLPEEQMGLGHAFEMDPELKNGF
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TT


TSSS
TTTSTT

GGG


S
TTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYELSQAQMAREIFPKAPLKYMPPTKFMTGNIFKGHIQDALFNMVTIMTNQRIHLLGMLTEALHTPFMSD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) STTS




TT

S
T
S


TTTTTSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence RALSIENAQYIFNNMESISEEIQFKEDGLIQKRAGFVLEKANELLEEIEQLGLFDTLEKGIFGGVKRPKD
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTT



TTSTTTTTT



TT
 .........500.........510......
Sequence GGKGLNGVVSKDENYYNPFVELMLNK
Predicted secondary structure










SS confidence

























Known secondary structure (DSSP)
SBTGGG

TT


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D