Fold library entry viewer: c3koxA_

Added to library: Sat Aug 28 21:19:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Q	L	R	V	N	E	K	L	D	V	E	N	I	L	K	D	L	D	K	Y	T	P	K	R	R	G	W	T	W	R	Q	P	A	E	N	L	Q	M	G	P	F	I	Y	K	D	A	S	T	P	L	E	N	S	V	A	L	P	S	A	K	Y	F	G	D	I	D	P	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S								T	T	T	G	G	G				S			S						B		T	T				T	T				S	S						S	S					G	G	G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	P	V	I	T	T	E	I	A	S	G	R	F	E	D	D	I	R	R	M	R	M	A	A	W	H	G	A	D	H	I	M	V	I	R	T	A	G	Q	S	H	Y	D	G	L	I	E	G	T	P	Q	G	I	G	G	V	P	I	T	R	K	Q	V	R	A	Q	R	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								S	S															T	T								B	S	T	T	G	G	G		S	S				S					S	S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	L	I	E	E	E	V	G	R	P	I	N	Y	H	S	Y	V	S	G	V	A	G	P	D	I	A	V	M	F	A	E	E	G	V	N	G	A	H	Q	D	P	Q	Y	N	V	L	Y	R	N	I	N	M	I	R	S	F	I	D	A	C	E	S	K	T	I	M	A	W	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S										S	T	T												T																	B																			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	A	Q	I	D	G	A	H	N	A	N	A	T	A	R	E	A	W	K	V	M	P	E	L	M	V	Q	H	A	L	N	S	I	F	S	L	K	V	G	M	K	K	S	N	I	C	L	S	T	V	P	P	T	A	P	P	A	P	S	M	Y	L	D	L	P	Y	A	V	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T								S	S	G	G	G																				T			G	G	G								S			T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	E	M	F	E	G	Y	R	M	R	A	Q	M	N	T	K	Y	M	E	A	S	T	R	E	A	T	V	T	H	V	L	N	L	L	I	S	K	L	T	R	A	D	I	Q	S	T	I	T	P	D	E	G	R	N	V	P	W	H	I	Y	N	I	E	A	C	D	T	A	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S									S	S			S																			S			S							T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	L	I	G	M	D	G	L	M	D	M	V	Q	L	K	R	E	G	V	L	G	D	T	V	R	E	L	K	E	R	A	V	L	F	M	E	E	I	I	E	A	G	G	Y	F	N	A	V	E	Q	G	F	F	V	D	S	G	Y	Y	P	E	R	N	G	D	G	I	A	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	G	G	G	T						S	S																							T	T	S							T	T		T	T		S	S		T	T				S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	N	G	G	I	G	A	G	T	V	F	E	R	D	E	D	Y	M	A	P	V	T	A	H	F	G	Y	N	N	V	K	Q	Y	D	E	A	L	V	S	E	P	S	K	L	I	D	G	C	T	L	E	V	P	E	K	I	V	Y	I	D	E	L	D	E	N	D	N	V	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	B	T	T	T							T	T					S	S	S			S									G	G	G	G	G		G	G	G	G	G	T			T	T	T		G	G	G							S		S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	M	E	E	T	K	E	F	R	S	M	I	K	P	E	V	E	W	Q	A	D	G	T	V	L	L	T	M	F	L	P	T	S	K	R	V	A	E	F	A	A	I	E	F	A	K	K	M	N	L	E	E	V	E	V	I	N	R	E	V	M	Q	E	A	E	G	T	R	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T									S	S	S	T	T											S	S																T	T														T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	K	G	R	V	P	F	S	I	D	I	N	S	L	V	I	P	P	I	L	S	E	D	E	I	R	E	D	I	E	K	T	P	L	K	I	V	A	A	T	V	G	E	D	E	H	S	V	G	L	R	E	V	I	D	I	K	H	G	G	I	E	K	Y	G	V	E	V	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S				G	G	G																			S										T	T										T	T	S	G	G	G	T		G	G	G	G	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	G	T	S	V	P	V	E	K	L	V	D	A	A	I	E	L	K	A	D	A	I	L	A	S	T	I	I	S	H	D	D	I	H	Y	K	N	M	K	R	I	H	E	L	A	V	E	K	G	I	R	D	K	I	M	I	G	C	G	G	T	Q	V	T	P	E	V	A	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T		S										G	G	G																	T		T	T	T	S							T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Sequence	Q	G	V	D	A	G	F	G	R	G	S	K	G	I	H	V	A	T	F	L	V	K	K	R	R	E	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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