PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ov3A_

Fold library id	PDB Header	Molecule	Title
c2ov3A_	PDB header: transport protein	Chain: A: PDB Molecule: periplasmic binding protein component of an abc	PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound

Links to external resources
Added to library: Tue Mar 16 11:55:02 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D A M D I T V S I P P Q Q Y F L E K I G G D L V R V S V L V P G N N D P H T Y E P K P Q Q L A A L S E A E A Y V L I G L G F E Q P W L E K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G S S
T T S
G G G
G G G
S
T T S S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K A A N A N M K L I D S A Q G I T P L E M P G R L M V A D P H I W L S P T L V K R Q A T T I A K E L A E L D P D N R D Q Y E A N L A A F L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T T T
B
S S S T T S B
G G G
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E L E R L N Q E L G Q I L Q P L P Q R K F I V F H P S W A Y F A R D Y N L V Q I P I E V E G Q E P S A Q E L K Q L I D T A K E N N L T M V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
T T
S
S S S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence G E T Q F S T K S S E A I A A E I G A G V E L L D P L A A D W S S N L K A V A Q K I A N A N S A Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T
T T
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	M	D	I	T	V	S	I	P	P	Q	Q	Y	F	L	E	K	I	G	G	D	L	V	R	V	S	V	L	V	P	G	N	N	D	P	H	T	Y	E	P	K	P	Q	Q	L	A	A	L	S	E	A	E	A	Y	V	L	I	G	L	G	F	E	Q	P	W	L	E	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S												G	G	G						S	S		T	T	S		G	G	G											G	G	G		S							T	T	S	S	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	A	N	A	N	M	K	L	I	D	S	A	Q	G	I	T	P	L	E	M	P	G	R	L	M	V	A	D	P	H	I	W	L	S	P	T	L	V	K	R	Q	A	T	T	I	A	K	E	L	A	E	L	D	P	D	N	R	D	Q	Y	E	A	N	L	A	A	F	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S					T	T	T	T					B		S	S	S	T	T	S	B				G	G	G																					G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	L	E	R	L	N	Q	E	L	G	Q	I	L	Q	P	L	P	Q	R	K	F	I	V	F	H	P	S	W	A	Y	F	A	R	D	Y	N	L	V	Q	I	P	I	E	V	E	G	Q	E	P	S	A	Q	E	L	K	Q	L	I	D	T	A	K	E	N	N	L	T	M	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		S							S	S										T	T						S			S	S	S				T	T													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	G	E	T	Q	F	S	T	K	S	S	E	A	I	A	A	E	I	G	A	G	V	E	L	L	D	P	L	A	A	D	W	S	S	N	L	K	A	V	A	Q	K	I	A	N	A	N	S	A	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S													T								T	T		S	S																	S