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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Jul 18

Fold library idPDB HeaderMoleculeTitle
c6u9dO_ 3.19 transferase Chain: O: acetolactate synthase small subunit, mitochondrial;
c6l80C_ 2.00 translation Chain: C: gamma-tubulin complex subunit mod21;
c6w2dk_ 4.00 viral protein Chain: K: major capsid protein;
c6lqhi_ 2.94 transport protein Chain: I: curli production assembly/transport component csgg;
c6vlkA_ 2.45 viral protein Chain: A: envelope glycoprotein b;
c6rxbD_ 2.25 transcription Chain: D: tetracycline repressor protein class g;
c6m3xV_ 2.24 oxidoreductase Chain: V:
c6lbsF_ 2.60 dna binding protein Chain: F: klla0c11825p;
c6ic9B_ 1.75 transcription Chain: B: phd finger protein 3;
c6w2dO_ 4.00 viral protein Chain: O: major capsid protein;
c6kfsA_ 1.20 metal binding protein Chain: A: lcib_c_ca domain-containing protein;
c6vz8G_ 3.45 plant protein Chain: G: acetolactate synthase small subunit 2, chloroplastic;
c6psdM_ 2.66 motor protein Chain: M: ef-hand calcium-binding domain-containing protein 4b;
c6l7rB_ 1.85 translation Chain: B: mozart1;
c6khpB_ 2.30 lyase Chain: B: tryptophan decarboxylase 1;
c6w2ew_ 4.40 viral protein Chain: W:
c6s4sE_ 2.15 hydrolase Chain: E: plyp35;
c6rmoO_ 2.60 hydrolase Chain: O: imp-specific 5'-nucleotidase, putative;
c6lfaA_ 2.30 lipid binding protein Chain: A: cell wall synthesis protein wag31;
c7bprB_ 1.95 protein binding Chain: B: testis-expressed protein 101;
c6vw9A_ 1.80 transport protein Chain: A: k+/cl-cotransporter;
c6kwwN_ 3.00 chaperone Chain: N: atp-dependent protease atpase subunit hslu;
c6lb8C_ 3.28 metal binding protein Chain: C: endolysin,calcium uptake protein 1, mitochondrial;
c6vwaA_ 2.20 transport protein Chain: A: k+/cl-cotransporter;
c6lbtA_ 2.60 dna binding protein Chain: A: klla0f20922p,klla0f20922p;
c6t70A_ 1.58 hydrolase Chain: A: both;
c7bpcA_ 2.45 biosynthetic protein Chain: A: 2,3-dihydroxybenzoate decarboxylase;
c6yvuB_ 7.50 cell cycle Chain: B: structural maintenance of chromosomes protein 4;
c6yvuA_ 7.50 cell cycle Chain: A: structural maintenance of chromosomes protein 2,structural
c6m37D_ 3.10 signaling protein Chain: D: anti-sigma-b factor antagonist;
c6xi9B_ 2.14 biosynthetic protein Chain: B: aminodeoxyfutalosine synthase;
c6w2dd_ 4.00 viral protein Chain: D:
c6ry9A_ UNK antimicrobial protein Chain: A: pleurocidin-like prepropolypeptide;
c6sbeA_ 1.40 biosynthetic protein Chain: A: mste;
c6m37C_ 3.10 signaling protein Chain: C: serine-protein kinase rsbw;
c6w2df_ 4.00 viral protein Chain: F:
c7ce1O_ 3.20 transcription Chain: O: laci-type transcription factor;
c6npsB_ 1.99 hydrolase Chain: B: axyagu115a;
c6l81C_ 2.20 translation Chain: C: gamma-tubulin complex component 5;
c6kfwA_ 2.00 oxidoreductase Chain: A: cxnd;
c6w2ey_ 4.40 viral protein Chain: Y:
c6u9hN_ 3.80 plant protein Chain: N: acetolactate synthase small subunit 2, chloroplastic;
c6znxD_ 2.40 transferase Chain: D: ribokinase;
c6s4iA_ 1.51 hormone Chain: A: insulin;
c6r16I_ 2.75 structural protein Chain: I: nesprin-4;
c6l82A_ 2.24 translation Chain: A: spindle pole body component;
c6wlvA_ 3.45 transport protein Chain: A: potassium channel task2;
c6yvuD_ 7.50 cell cycle Chain: D: condensin complex subunit 1,condensin complex subunit 1,
c6tabA_ 1.26 hydrolase Chain: A: slt domain-containing protein;
c6pseB_ 2.40 motor protein Chain: B: protein bicaudal d homolog 2;
c6s4lC_ 2.42 signaling protein Chain: C: btb/poz domain-containing protein kctd1;
c7c4jD_ 2.89 dna binding protein Chain: D: swi/snf complex subunit swi3;
c6lbrA_ 2.50 dna binding protein/dna Chain: A: klla0f20922p;
c6m5nA_ 1.84 oxidoreductase Chain: A: borneol dehydrogenase;
c7c4jH_ 2.89 dna binding protein Chain: H: transcription regulatory protein snf2;
c6w2dz_ 4.00 viral protein Chain: Z: small capsomere-interacting protein;
c6wgf6_ 7.70 replication Chain: 6: dna replication licensing factor mcm6;
c6w2dK_ 4.00 viral protein Chain: K: major capsid protein;
c6s44A_ 3.19 virus Chain: A: capsid protein;
c7c4jA_ 2.89 dna binding protein Chain: A: transcription regulatory protein snf12;
c6lbuB_ 2.00 dna binding protein Chain: B: klla0e09417p;
c6r16G_ 2.75 structural protein Chain: G: nesprin-4;
c6u08E_ 2.49 toxin Chain: E: double-stranded dna-specific cytidine deaminase;
c6lqhb_ 2.94 transport protein Chain: B: curli production assembly/transport component csgg;
c6ryuW_ 4.00 transcription Chain: W: chromodomain-helicase-dna-binding protein 4,chd4,
c6ppsB_ 2.80 signaling protein Chain: B: blue-light-activated histidine kinase;
c6s09H_ 1.50 structural protein Chain: H: fima;
c6kr1D_ 2.00 hydrolase Chain: D: atp-dependent protease subunit hslv;
c6l80D_ 2.00 translation Chain: D: mitotic-spindle organizing protein 1;
c7c4jB_ 2.89 dna binding protein Chain: B: swi/snf complex subunit swi3;
c6r16K_ 2.75 structural protein Chain: K: nesprin-4;
c6n8aB_ 3.40 transcription Chain: B: transcription regulator acab;
c6l81B_ 2.20 translation Chain: B: mitotic-spindle organizing protein 1;
c6w2ev_ 4.40 viral protein Chain: V:
c6rwcB_ 2.14 unknown function Chain: B: chicken beta-microseminoprotein-like 3;
c6ltyB_ 3.28 antitoxin, dna binding protein/dna Chain: B: putative antitoxin higa3;
c6wgi5_ 10.00 replication/dna Chain: 5: minichromosome maintenance protein 5;
c6s6hA_ 2.40 dna binding protein Chain: A: chromosome-partitioning protein parb;
c6xxwA_ 1.85 hydrolase Chain: A: beta-glucuronidase;
c6lqhd_ 2.94 transport protein Chain: D: curli production assembly/transport component csgg;
c6waaD_ 3.20 isomerase/dna/isomerase inhibitor Chain: D: dna topoisomerase 4 subunit b,dna topoisomerase (atp-
c6ll9A_ 2.70 ligase Chain: A: d-alanine--d-alanine ligase;
c7cc4B_ 2.00 hydrolase Chain: B: cutinase-like enzyme;
c6u08H_ 2.49 toxin Chain: H: dddi;
c6rzcA_ UNK antimicrobial protein Chain: A: pleurocidin-like peptide wf4;
c7c4jG_ 2.89 dna binding protein Chain: G: unkown;
c6wgf2_ 7.70 replication Chain: 2: dna replication licensing factor mcm2;
c6ryqA_ UNK antimicrobial protein Chain: A: pleurocidin-like prepropolypeptide;
c6lqhf_ 2.94 transport protein Chain: F: curli production assembly/transport component csgg;
c7bpsB_ 2.35 protein binding Chain: B: testis-expressed protein 101;
c6zhoA_ 1.60 membrane protein Chain: A: maltose/maltodextrin-binding periplasmic protein,receptor
c6l7rA_ 1.85 translation Chain: A: putative spindle pole body component alp6 protein;
c6w2ez_ 4.40 viral protein Chain: Z: small capsomere-interacting protein;
c7c4jE_ 2.89 dna binding protein Chain: E: swi/snf global transcription activator complex subunit
c7c4jF_ 2.89 dna binding protein Chain: F: swi/snf chromatin-remodeling complex subunit snf5;
c6yvuC_ 7.50 cell cycle Chain: C: condensin complex subunit 2,condensin complex subunit 2,
c7c4jC_ 2.89 dna binding protein Chain: C: transcription regulatory protein snf6;
c6lqha_ 2.94 transport protein Chain: A: curli production assembly/transport component csgg;
c6w2dy_ 4.00 viral protein Chain: Y:
c6r16J_ 2.75 structural protein Chain: J: nesprin-4;
c7c4jI_ 2.89 dna binding protein Chain: I: swi/snf chromatin-remodeling complex subunit swi1;
c6yvvB_ 7.50 cell cycle Chain: B: structural maintenance of chromosomes protein 4;
c6lqhh_ 2.94 transport protein Chain: H: curli production assembly/transport component csgg;
c6z3wD_ 6.40 membrane protein Chain: D: er membrane protein complex subunit 4;
c6r2iB_ 1.54 structural protein Chain: B: kash5;
c6lqhc_ 2.94 transport protein Chain: C: curli production assembly/transport component csgg;
c6s4jA_ 1.50 hormone Chain: A: insulin;
c6ll9B_ 2.70 ligase Chain: B: d-alanine--d-alanine ligase;
c6zcwA_ 1.65 oxidoreductase Chain: A: quinoprotein ethanol dehydrogenase;
c6lbuA_ 2.00 dna binding protein Chain: A: klla0c11825p;
c6rz1A_ UNK antimicrobial protein Chain: A: pleurocidin-like peptide wf3;
c6w6vE_ 3.00 hydrolase Chain: E: ribonuclease p/mrp protein subunit pop5;
c6lqhe_ 2.94 transport protein Chain: E: curli production assembly/transport component csgg;
c6s2dA_ UNK antimicrobial protein Chain: A: pleurocidin-like prepropolypeptide;
c6wo1A_ 3.30 transferase Chain: A: acetohydroxyacid synthase catalytic subunit;
c6wgf7_ 7.70 replication Chain: 7: dna replication licensing factor mcm7;
c6u9dR_ 3.19 transferase Chain: R: acetolactate synthase catalytic subunit, mitochondrial;
c6z7pA_ 4.80 structural protein Chain: A: s-layer protein;
c6lqhg_ 2.94 transport protein Chain: G: curli production assembly/transport component csgg;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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