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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ll9B_

Fold library idPDB HeaderMoleculeTitle
c6ll9B_2.70PDB header: ligaseChain: B: PDB Molecule: d-alanine--d-alanine ligase;


Added to library: Sat Jul 18 08:40:13 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIHVLLLCGGGGSEHEVSLRSANFLEQQLGLLPGVDVTRVEMFADRWLSADGRECKLGLDKLLSFDSVAR
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Known secondary structure (DSSP)



TTSTTTTSSS






SS
TTS

TTS
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence PVDYVVPCIHGYPGETGDLQSFLELAGLPYLGCDAEASKICFNKISTKLWLSAIGIPNTPYLFLTEQNDA
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Known secondary structure (DSSP)
S

SSTTTTTTTT

BSS

STT

B




S
SS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALSEAKAALVKGIADAFKAVPRELEVAVYQYGDELVATYPGEICALRAEGLTQAQADAIHEYALKAFRQL
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Known secondary structure (DSSP)
SS
S





SSTTT




TT






S

S

T
 .........220.........230.........240.........250.........260......
Sequence KLTHLSRIDFFLTEEGEILLNEINTFPGMTSISMFPKLLEHHGHRFVDYLEQILRK
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Known secondary structure (DSSP) T

S
TT

SS


STT
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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