Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7c4jD_

Fold library idPDB HeaderMoleculeTitle
c7c4jD_2.89PDB header: dna binding proteinChain: D: PDB Molecule: swi/snf complex subunit swi3;


Added to library: Sat Jul 18 08:44:23 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPQAHEIVIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTAR
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)



S




GGGTT

TT



GGGTSTT
TT

TT
TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence RNVSGDAAALFRLHKFLTKWGLINYQVDSKLLPKNIEPPLTSQYSTRHDAPRGLFPFESYKPSVQLPDMA
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) S
S
SSSSSTTSS









TTSSTT


SSS

SS










 .........150.........160.........170.........180.........190.........200.........210
Sequence KLKKMMNTSDSESTLYKYLKESKRKYDEITHPPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVA
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)






TSS

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNVGNKSPEQCILRFLQLPIEDKFLYGDGNGLGPLKYAPHLPFSKSENPVLSTIAFLVGLVNPKTVQSMT
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SSS
TT

SSS
SSS




SSGGGG



SSS



TTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence QRAIQSAESIKSQKEEISDQKPIEHIKEGSEIAISSLGYRSHIFATNEERQMNFLTNELIRLQMEKLDAK
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) SSS

STTS
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence LNHLKKLEKFMELERKTLERQQENLLIQRLNFNQNSSKIVNVLSKCLNLISEIRSQIDHFKSMLSKPETL
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP) T

TT
S
 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D