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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6npsB_

Fold library idPDB HeaderMoleculeTitle
c6npsB_1.99PDB header: hydrolaseChain: B: PDB Molecule: axyagu115a;


Added to library: Sat Jul 18 08:43:04 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGMDFTLNQEMLMTDTKSGALFYQEEEALSGVRKIANKVMHDVELVFGYQPEATKDRDMLSRHAVLYGTV
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Known secondary structure (DSSP)

S
GGGTSTTT

S

TTS
SS


S
GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GHSPLLDELNAAALIDLTEIAGKREVFLFQVVDQPIQGVEKALVIAGSDKRGTIYGLFHLSEKLGVSPLV
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Known secondary structure (DSSP) TS
TTSS
GGGTTT
SS
TTSSTT

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DWSGVLPARKESFSLKGDYKYVSKEPSVKYRGFFINDEWPAFGNWSAKNFGGFNAEMYDHVFELLLRLKG
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Known secondary structure (DSSP) TTS






S
TT




SSS

S
TTSSSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NYLWPAMWSARFNDDGPGLANVELADEYGVIMGASHHEPCLRYGEEYKYLRGPDSIYGDAWNFITNREGI
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Known secondary structure (DSSP)



SS

TTTBTTBTT



TT

TT

TT

TTSTT
S
S
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TKFWEDGLKRTGHFENIITIGMRDATLEDNINLLRDVIQTQNKLIKEHVNPNLKEVPRMLALYKEVEPFF
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Known secondary structure (DSSP) TTSSB






T
S
GGGS


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YGDENTPGLINSEELEDVILMLCDDNHGNLRTLPTEDMRKHSGGYGMYYHFDYHGGPVSYEWINSSYLPK
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Known secondary structure (DSSP) B
SSSB
STT
GGGTT
B
SSS
B




TTGGG
TT
SSB
SSS

B
SS



 .........430.........440.........450.........460.........470.........480.........490
Sequence IWEQMTMAYDFGVRDLWIVNVGDIATQELPLSFFLDLAYDFDKWGTNAINKTDDYTKQWIEQQFAGVFNL
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Known secondary structure (DSSP) TT

S
TT
TT

STTSTT
TTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence EQKDKVFELLNGYTKIAHNRRPEAMNVDVYHPVNYHETDQLLDRIDHLLGLAEELYQEVDQQHFTAYFAL
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Known secondary structure (DSSP) S
GGG

TTSS
SSGGGS
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence VYYPTVGNLNLQKMWLLNGKNKYAAQLNLIEANKLAEQVKACLKRDQEIVDEYHTIADGKFYGMGLSEHI
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Known secondary structure (DSSP) TTT
TTTTTTT
S

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence GFVHWNEDENKNPVLSYVLPVNKPRLLVSIDGTELRSEGSPWHVNTLPLVDFLEPDVNQASFTISSVSEK
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Known secondary structure (DSSP)

SSSSSTT










BSS

TTSS



TTS



GGGSTT


SBSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence KAEYHISTDQDWLSCSAANGVLDGKNKLSETIHVFVDRDGLADQAEGRITVKTPVGKVTIVVPVVNNDFT
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Known secondary structure (DSSP)
S
TTS
S
SSS



TT

S
SS




T
 .........780.........790.........800.........810.........820.........830.........840
Sequence NYPDMTFVDTKGYISIEAEHFATQKATENLDGTLNRFEVLDGYGKTLSAIKAFPTDTHYQVGKDAPFVEY
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Known secondary structure (DSSP) TS
TT
SSS
TT

S

TTS
T
SSSSSTT



TTTT

 .........850.........860.........870.........880.........890.........900.........910
Sequence HFVTQEAGVYELEFYLQPSNPVTREGTMYAGIQVNENDVDVINVLPDGYHVDGPHWGIDVINNIRTTKTK
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Known secondary structure (DSSP) SS





SSTT


TTS


S
TT

TTST
 .........920.........930.........940.........950........
Sequence ITCEQGLNKLRIYAVSPGFALEKIVIYPDGKKLANSYLGPNETYYVGR
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Known secondary structure (DSSP)
S
STT

TT





SS
S



BTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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