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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w2dk_

Fold library idPDB HeaderMoleculeTitle
c6w2dk_4.00PDB header: viral proteinChain: K: PDB Molecule: major capsid protein;


Added to library: Sat Jul 18 08:33:03 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDLKVVVSLSSRLYTDEIAKMQQRIGCILPLASTHGTQNVQGLGLGQVYSLETVPDYVSMYNYLSDCTLA
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Known secondary structure (DSSP)




SS


TTTTTTT
SS

S
STTTSSTTT

SSS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLDEVSVDSLILTKIVPGQTYAIKNKYQPFFQWHGTGSLSVMPPVFGREHATVKLESNDVDIVFPMVLPT
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Known secondary structure (DSSP) TT

TT






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TT




S
TTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PIAEEVLQKILLFNVYSRVVMQAPGNADMLDVHMHLGSVSYLGHHYELALPEVPGPLGLALLDNLSLYFC
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Known secondary structure (DSSP) STTS
TTSSTT



SS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IMVTLLPRASMRLVRGLIRHEHHDLLNLFQEMVPDEIARIDLDDLSVADDLSRMRVMMTYLQSLASLFNL
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Known secondary structure (DSSP) TS

S


SGGGSS
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SS
 .........290.........
Sequence GPRLATAAYSQETLTATCW
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Known secondary structure (DSSP) S



TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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