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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vlkA_

Fold library idPDB HeaderMoleculeTitle
c6vlkA_2.45PDB header: viral proteinChain: A: PDB Molecule: envelope glycoprotein b;


Added to library: Sat Jul 18 08:33:28 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TKPTFYVCPPPTGSTIVRLEPPRTCPDYHLGKNFTEGIAVVYKENIAAYKFKATVYYKDVIVSTAGAGSS
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S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTQITNRYADRVPIPVSEITDTIDKFGKCSSKATYVRNNHKVEAFNEDKNPQDMPLIASKYNSVGSKAWH
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Known secondary structure (DSSP)


TSSTTGGGS




TT

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TTNDTYMVAGTPGTYRTGTSVNCIIEEVEARSIFPYDSFGLSTGDIIYMSPFFGLRDGAYREHSNYAMDR
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Known secondary structure (DSSP) S
S






STT

TT
S
TTS

B
TT

SSTTGGGS
B
S
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FHQFEGYRQRDLDTRALLEPAARNFLVTPHLTVGWNWKPKRTEVCSLVKWREVEDVVRDEYAHNFRFTMK
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Known secondary structure (DSSP)

B
TTT
SB



SS



GGGT

STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLSTTFISETNEFNLNQIHLSQCVKEEARAIINRIYTTRYNSSHVRTGDIQTYLARGGFVVVFQPLLSNS
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Known secondary structure (DSSP) TTT
SS


GGGBTT
TTTT
SS
TTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence NRTITTTSSVEFAMLQFTYDHIQEHVNEMLARISSSWCQLQNRERALWSGLFPINPSALASTILDQRVKA
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Known secondary structure (DSSP)
B




S

TTT
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RILGDVISVSNCPELGSDTRIILQNSMRVSGSTTRCYSRPLISIVSLNGSGTVEGQLGTDNELIMSRDLL
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Known secondary structure (DSSP)
SSS

B

SS
SB
B
TT
SSSS
TTSS

STTSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence EPCVANHKRYFLFGHHYVYYEDYRYVREIAVHDVGMISTYVDLNLTLLKDREFMPLQVYTRDELRDTGLL
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Known secondary structure (DSSP)

TT
TTTTGGGS






















SS
TS
SS
 .........570.........580....
Sequence DYSEIQRRNQMHSLRFYDIDKVVQ
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Known secondary structure (DSSP)
TTS
SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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