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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2017 Nov 18

Fold library idPDB HeaderMoleculeTitle
c6b2xB_ 2.20 metal transport Chain: B: solute-binding periplasmic protein of iron/siderophore abc
c6aozD_ 2.10 gene regulation Chain: D: casp8-associated protein 2;
c5lj7B_ 3.25 transport protein Chain: B: macrolide export atp-binding/permease protein macb;
c5vx3H_ 1.95 apoptosis Chain: H: bcl-2-like protein 11;
c5wp5A_ 1.50 transferase Chain: A: phosphomethylethanolamine n-methyltransferase 2;
c5uz5A_ 3.56 nuclear protein/rna Chain: A: u1 small nuclear ribonucleoprotein 70 kda homolog;
c5oixD_ 1.61 viral protein Chain: D: phosphoprotein;
c5o8yG_ 2.30 transcription Chain: G: transcriptional regulatory protein rcsb;
c5ws9C_ 1.90 transferase Chain: C: pyruvate kinase;
c5vwzD_ 1.62 apoptosis Chain: D: bcl-2-like protein 11;
c5w68B_ 3.30 membrane protein Chain: B: putative type ii secretion protein;
c5na8B_ 3.29 hydrolase Chain: B: putative dipeptidyl-peptidase iii;
c5y1dB_ 1.90 oxidoreductase Chain: B: nad dependent epimerase/dehydratase family;
c5oiyG_ 2.20 viral protein Chain: G: phosphoprotein;
c6b3aA_ 1.78 transferase Chain: A: apra methyltransferase 1;
c5oiyE_ 2.20 viral protein Chain: E: phosphoprotein;
c5y9hA_ 2.80 cell adhesion Chain: A: safd,putative outer membrane protein,putative outer
c5n9yB_ 4.20 membrane protein Chain: B: zinc transport protein zntb;
c5vwxB_ 2.49 apoptosis Chain: B: bcl-2-like protein 11;
c5ws4A_ 3.40 membrane protein Chain: A: macrolide export atp-binding/permease protein macb;
c6erpJ_ 4.50 transcription Chain: J: dimethyladenosine transferase 2, mitochondrial;
c5osgh_ 2.90 ribosome Chain: H:
c5op0B_ 1.84 transferase Chain: B: dna polymerase ligd, polymerase domain;
c5wwlM_ 2.40 cell cycle Chain: M: centromere protein mis12;
c5vwzB_ 1.62 apoptosis Chain: B: bcl-2-like protein 11;
c5uz5F_ 3.56 nuclear protein/rna Chain: F: protein nam8;
c5lefC_ 2.09 protein transport Chain: C: kinesin-like protein kif20a;
c6az0A_ 3.40 hydrolase Chain: A: mitochondrial inner membrane i-aaa protease supercomplex
c5vx3F_ 1.95 apoptosis Chain: F: bcl-2-like protein 11;
c5vx0B_ 1.60 apoptosis Chain: B: bcl-2-like protein 11;
c5uz5K_ 3.56 nuclear protein/rna Chain: K: small nuclear ribonucleoprotein-associated protein b;
c5npyA_ 2.29 motor protein Chain: A: flagellar basal body protein;
c5jriA_ 1.95 oxidoreductase Chain: A: pyridine nucleotide-disulfide oxidoreductase;
c5oiyC_ 2.20 viral protein Chain: C: phosphoprotein;
c5odeA_ 2.20 oxidoreductase Chain: A: gll2934 protein;
c5wwlN_ 2.40 cell cycle Chain: N: kinetochore protein nnf1;
c5yi4A_ UNK protein binding Chain: A: disrupted in schizophrenia 1 homolog,nuclear distribution
c6b5bA_ 5.20 immune system Chain: A: baculoviral iap repeat-containing protein 1e;
c5uz5C_ 3.56 nuclear protein/rna Chain: C: u1 small nuclear ribonucleoprotein a,tap tag;
c5oixA_ 1.61 viral protein Chain: A: phosphoprotein;
c5vmmE_ 3.60 transport protein Chain: E: iron-regulated cell wall-anchored protein;
c5oixH_ 1.61 viral protein Chain: H: phosphoprotein;
c5vwvB_ 1.90 apoptosis Chain: B: bcl-2-like protein 11;
c5vx2D_ 1.85 apoptosis Chain: D: bcl-2-like protein 11;
c5mu5A_ 2.30 transferase Chain: A: uncharacterized protein;
c5whgA_ 2.70 dna binding protein Chain: A: protein vms1;
c5wpiB_ 2.30 transferase Chain: B: hsva;
c5oiyA_ 2.20 viral protein Chain: A: phosphoprotein;
c5x7kB_ 2.65 transport protein Chain: B: lipase b;
c5na2A_ 1.67 viral protein Chain: A: capsid protein (p24);
c5naaB_ 1.88 protein transport Chain: B: lipoprotein-releasing system transmembrane protein lolc;
c5uz5G_ 3.56 nuclear protein/rna Chain: G: 56 kda u1 small nuclear ribonucleoprotein component;
c5vx2B_ 1.85 apoptosis Chain: B: bcl-2-like protein 11;
c5oiyH_ 2.20 viral protein Chain: H: phosphoprotein;
c6erqA_ 4.50 transcription Chain: A: dna-directed rna polymerase, mitochondrial;
c5oiyF_ 2.20 viral protein Chain: F: phosphoprotein;
c5vwwC_ 2.80 apoptosis Chain: C: bcl-2-like protein 11;
c5oixE_ 1.61 viral protein Chain: E: phosphoprotein;
c5vwwD_ 2.80 apoptosis Chain: D: bcl-2-like protein 11;
c5vwyB_ 1.56 apoptosis Chain: B: bcl-2-like protein 11;
c5w4lM_ 2.92 viral protein/immune system Chain: M: cd4 mimetic peptide m48u1;
c5uz5E_ 3.56 nuclear protein/rna Chain: E: pre-mrna-processing factor 39;
c6eojA_ 3.55 rna binding protein Chain: A: protein cft1;
c5vwxD_ 2.49 apoptosis Chain: D: bcl-2-like protein 11;
c5oiyD_ 2.20 viral protein Chain: D: phosphoprotein;
c6b5bF_ 5.20 immune system Chain: F: flagellin;
c5oixC_ 1.61 viral protein Chain: C: phosphoprotein;
c5opth_ 4.00 ribosome Chain: H:
c5omtA_ 1.35 hydrolase Chain: A: nucb;
c6eojB_ 3.55 rna binding protein Chain: B: mrna 3'-end-processing protein yth1;
c5oiyB_ 2.20 viral protein Chain: B: phosphoprotein;
c5w4lN_ 2.92 viral protein/immune system Chain: N: cd4 mimetic peptide m48u1;
c5vx3D_ 1.95 apoptosis Chain: D: bcl-2-like protein 11;
c5uz5D_ 3.56 nuclear protein/rna Chain: D: u1 small nuclear ribonucleoprotein component prp42;
c5oixB_ 1.61 viral protein Chain: B: phosphoprotein;
c5u32A_ 2.19 transferase Chain: A: trna ligase;
c6eojD_ 3.55 rna binding protein Chain: D: polyadenylation factor subunit 2,polyadenylation factor
c6ap0B_ 2.58 gene regulation Chain: B: casp8-associated protein 2;
c5vx0D_ 1.60 apoptosis Chain: D: bcl-2-like protein 11;
c5vx3B_ 1.95 apoptosis Chain: B: bcl-2-like protein 11;
c5oixF_ 1.61 viral protein Chain: F: phosphoprotein;
c5oixG_ 1.61 viral protein Chain: G: phosphoprotein;
c5uz5H_ 3.56 nuclear protein/rna Chain: H: protein luc7;
c5uz5B_ 3.56 nuclear protein/rna Chain: B: u1 small nuclear ribonucleoprotein c;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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