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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5na8B_

Fold library idPDB HeaderMoleculeTitle
c5na8B_3.29PDB header: hydrolaseChain: B: PDB Molecule: putative dipeptidyl-peptidase iii;


Added to library: Sat Nov 18 08:40:14 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQAALEGRDILFDQNGKYNLRIRRXLEAVYTNYKG
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Known secondary structure (DSSP)


TT


TT
TTS
TTT
TTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKSAPDFKNXEVYLKRVWFSNGIHHHYGXEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLSDELFP
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Known secondary structure (DSSP)
TTSTSSB
TTT
BB


SS
TS
TTTS


TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VXFDPAILAKRVNQADGEDLVLTSASNYYDGVTQQEAESFYGAXKDPKDETPVSYGLNSRLVKGKIQEKV
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Known secondary structure (DSSP)
TTSS
BSS


TTS
TTTT


SSBSS

TT

TT
SS


SSSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence WKVGGLYTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGF
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Known secondary structure (DSSP) BSTTSBTT
SS



S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TESYGDPLGVKASWESLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAILAGD
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Known secondary structure (DSSP)


TTSTTS
S


TT
SS
GGGS
SS


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNEEFVSNDEERQRIDQYGDLTGELHT
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Known secondary structure (DSSP) TSSS

S


T
TTSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DLHESLGHGSGKLLPGVDPDALKAYGSTIEEARADLFGLYYVADPKLVELKLVPDAEAYKAEYYTFLXNG
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Known secondary structure (DSSP) TTTTS



TT

TTSSGGGT
TTTSSSSTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LXTQLVRIEPGNNIEEAHXRNRQLIARWVFEKGAPDKVVEXVKKDGKTYVVVNDYEKVRQLFGELLAEIQ
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Known secondary structure (DSSP) TGGGGGS
TT



STTTTTSTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence RIKSTGDFEGARTLVENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTDKDGNITDVTVSYNED
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Known secondary structure (DSSP) T
SS


TTT

S


SSS




 .........640.........
Sequence YVEQXLRYSKDYSPLPSVN
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Known secondary structure (DSSP) S

S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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