Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5npyA_

Fold library idPDB HeaderMoleculeTitle
c5npyA_2.29PDB header: motor proteinChain: A: PDB Molecule: flagellar basal body protein;


Added to library: Sat Nov 18 08:38:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDNFLTRAGNFARDADGYLVTPEGYYVYGIDLK
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
B

STS
BS
TT


SS
SS





TTSB
TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence KIKDGTLNSTARDEDIEKLHGNTLSPLQIPQDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEII
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)
TT



TT
S
B

SS


B




TTSTB
TTS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence KERFLNQDINALANDDNEPIDAITNRKLNVSIQKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLN
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP)
BTTS
B
TT

B

TTT



S
TTSSSS
BSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIKSEKDAKSPPLLLEIANPSQTPITFSLSGGIADKLGLNANGMELKKGISRDSVAIKIPYYSTEVDIYD
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) SSTTSSS



SSS
ST


SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence KAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEVKSYIVDPKNKTPINDPTWEIVGFDSATHKMKSAPM
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) TT




TT

TT
TT
STTTTSS


SSS
B


 .........360.........370.........380.........390.........400.........410.........420
Sequence TLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFRDMRIEENGVISLAFSNGVVEPVARI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TTSSB
SS
B
B

TTS
SS
B


TT
TTS
 .........430.........440.........450.........460.........470..
Sequence GILAFTNDQGLRKIGGNLYEMQEGPLSGNPILGWDEEGKLKFGKIRHKYLET
Predicted secondary structure

























SS confidence



















































Known secondary structure (DSSP)


S
GGGSTTT





S
S
SB
TTS
BSSTB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D