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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uz5E_

Fold library idPDB HeaderMoleculeTitle
c5uz5E_3.56PDB header: nuclear protein/rnaChain: E: PDB Molecule: pre-mrna-processing factor 39;


Added to library: Sat Nov 18 08:38:12 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALRGLDTQFLQDNTALVQAYRGLDWSDISSLTQMVDVIEQTVVKYGNPNDSIKLALETILWQILRKYPLL
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Known secondary structure (DSSP)


S
TS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FGFWKRFATIEYQLFGLKKSIAVLATSVKWFPTSLELWCDYLNVLCVNNPNETDFIRNNFEIAKDLIGKQ
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Known secondary structure (DSSP) S
TT
SSSS

TTTTSTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FLSHPFWDKFIEFEVGQKNWHNVQRIYEYIIEVPLHQYARFFTSYKKFLNEKNLKTTRNIDIVLRKTQTT
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Known secondary structure (DSSP) TS

TTTTTTTTTTTT


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNEIWQFESKIKQPFFNLGQVLNDDLENWSRYLYHENTWMMYIKWLTKKNISDEVVVDIYQKANTFLPLD
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Known secondary structure (DSSP) S


ST


TTTTT

S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKTLRYDFLRFLKRKYRSNNTLFNNIFNETVSRYLKIWPNDILLMTEYLCMLKRHSFKNSLDQSPKEILE
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Known secondary structure (DSSP)

SGGGS


SS
S

TT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence KQTSFTKILETSITNYINNQIDAKVHLQTLINDKNLSIVVVELIKTTWLVLKNNMQTRKYFNLYQKNILI
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Known secondary structure (DSSP) TT


SSST

TTTTS

SS
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KNSVPFWLTYYKFEKSNVNFTKLNKFIRELGVEIYLPTTVMNDILTDYKTFYLTHSNIVTYESSIIDSNT
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Known secondary structure (DSSP) SS
S

STTTTTS




TT

SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FDPILYPELKMSNPKYDPVLNTTANVDWHKKTEWKEAGHIGITTERPQISNSIIECNSGTLIQKPISLPN
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Known secondary structure (DSSP)

TTTTSS
TT





STTTSSTSSSSS





SS
STTS
SSS





 .........570.........580...
Sequence FRNLEKINQVKINDLYTEEFLKE
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Known secondary structure (DSSP) SGGGGS





T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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