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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5op0B_

Fold library idPDB HeaderMoleculeTitle
c5op0B_1.84PDB header: transferaseChain: B: PDB Molecule: dna polymerase ligd, polymerase domain;


Added to library: Sat Nov 18 08:34:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATELDVDGVKVRFTNPDKVYFPKLGKNGTKGKLVEYYLSVASGPMLALLRDRPVHLQRFPDGIEGEEIYQ
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Known secondary structure (DSSP)
TT

TT
BS
TTTGGGGBTTTTT

TT
TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence KRVPQKHPDYLETCVVTFPSGRTADALKITHPSSIIWAAQMGTVTLHPWQVRCPDTEHPDELRVDLDPQP
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Known secondary structure (DSSP)
S

SS

TT

TTS


STT
SSBTTBTTS
S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GTGFKEARTVACDVLKPLLDELGLVGYPKTSGGRGVHVFLRIKPQWDFIEVRRAGIALAREVERRAPDAV
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Known secondary structure (DSSP) T

TTT



SSS
B
TTS
STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TTSWWKEERGERLFIDYNQNARDRTFASAYSVRKTPIATVSMPLSWDELRNADPDDYTMNTVPDLLAGRD
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Known secondary structure (DSSP)

SSGGGT
SS
GGGGSSS




TT
B
SSTT
BB

B

T

GGG
BTTTTT

 .........290.........300.........310.........320.........330.
Sequence DPWADIDSVQQSLGPLLDLVAADEERGLGDLPYPPNYPKMPGEPPRVQPSK
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Known secondary structure (DSSP)
TTTTGGG

B
STT





STT



TT









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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