Email l.a.kelley@imperial.ac.uk Description P0AAM3 Date Thu Jan 5 11:13:17 GMT 2012 Unique Job ID d556ceb9b9c1cc6c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ot2a1 100.0 100 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 2 c3d3rA_ 100.0 29 PDB header:chaperone Chain: A: PDB Molecule:hydrogenase assembly chaperone hypc/hupf; PDBTitle: crystal structure of the hydrogenase assembly chaperone hypc/hupf2 family protein from shewanella oneidensis mr-1 3 d2z1ca1 99.9 35 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 4 d3d3ra1 99.9 29 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 5 c2rcnA_ 79.8 19 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium. 6 c4a2iV_ 78.7 19 PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor 7 c2yv5A_ 70.5 12 PDB header:hydrolase Chain: A: PDB Molecule:yjeq protein; PDBTitle: crystal structure of yjeq from aquifex aeolicus 8 c2hc8A_ 48.3 29 PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain 9 d1rl2a2 46.6 29 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 10 c1xniI_ 46.1 20 PDB header:cell cycle Chain: I: PDB Molecule:tumor suppressor p53-binding protein 1; PDBTitle: tandem tudor domain of 53bp1 11 c1g0dA_ 44.2 33 PDB header:transferase Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: crystal structure of red sea bream transglutaminase 12 c1kv3F_ 43.6 33 PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form 13 c1l9mB_ 43.2 22 PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation 14 d1vfsa1 42.7 11 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Alanine racemase 15 c1f13A_ 40.8 44 PDB header:coagulation factor Chain: A: PDB Molecule:cellular coagulation factor xiii zymogen; PDBTitle: recombinant human cellular coagulation factor xiii 16 c1u0lB_ 40.0 19 PDB header:hydrolase Chain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima 17 c2rhsB_ 39.0 24 PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies 18 d1njjb1 37.0 22 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 19 d1g0da4 37.0 40 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 20 d2q3za4 34.7 40 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 21 d1u0la1 not modelled 34.4 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 22 c2e8gB_ not modelled 34.2 19 PDB header:rna binding protein Chain: B: PDB Molecule:hypothetical protein ph0536; PDBTitle: the structure of protein from p. horikoshii at 1.7 angstrom2 resolution 23 d1ex0a4 not modelled 33.8 50 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 24 d1d7ka1 not modelled 32.1 22 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 25 d1vjja4 not modelled 31.9 30 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 26 c2opkC_ not modelled 31.5 21 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 27 c3mxnB_ not modelled 30.6 18 PDB header:replication Chain: B: PDB Molecule:recq-mediated genome instability protein 2; PDBTitle: crystal structure of the rmi core complex 28 c2fhdA_ not modelled 30.1 17 PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains 29 d2toda1 not modelled 30.0 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 30 d2nn6h1 not modelled 30.0 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 31 c2dbiA_ not modelled 29.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli 32 c2nvaH_ not modelled 28.4 16 PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine 33 d2csga1 not modelled 27.5 26 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:YbiU-like 34 c3m9bK_ not modelled 26.7 15 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 35 c1njjC_ not modelled 26.1 33 PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 36 d1tt2a_ not modelled 25.5 27 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 37 d2soba_ not modelled 25.4 25 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 38 d1f3ta1 not modelled 24.8 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 39 c2oqkA_ not modelled 24.6 28 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 40 c3fp9E_ not modelled 24.4 13 PDB header:hydrolase Chain: E: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis 41 d1hh2p1 not modelled 24.1 11 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 42 c2pljA_ not modelled 23.9 13 PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus 43 c1ltlE_ not modelled 23.0 15 PDB header:replication Chain: E: PDB Molecule:dna replication initiator (cdc21/cdc54); PDBTitle: the dodecamer structure of mcm from archaeal m.2 thermoautotrophicum 44 d1pqwa_ not modelled 22.6 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 45 d2gy9q1 not modelled 22.6 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 46 c3bu2B_ not modelled 22.6 26 PDB header:rna binding protein Chain: B: PDB Molecule:putative trna-binding protein; PDBTitle: crystal structure of a trna-binding protein from2 staphylococcus saprophyticus subsp. saprophyticus.3 northeast structural genomics consortium target syr77 47 c3j09A_ not modelled 22.3 29 PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa 48 d2fzwa2 not modelled 22.1 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 49 c2qghA_ not modelled 22.1 8 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from helicobacter2 pylori complexed with l-lysine 50 c2vl6C_ not modelled 21.6 18 PDB header:dna binding protein Chain: C: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: structural analysis of the sulfolobus solfataricus mcm2 protein n-terminal domain 51 d7odca1 not modelled 20.4 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 52 d1v3va2 not modelled 20.2 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 53 d1ltla_ not modelled 19.8 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA replication initiator (cdc21/cdc54) N-terminal domain 54 d1knwa1 not modelled 19.6 17 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 55 c2p1gA_ not modelled 18.8 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative xylanase; PDBTitle: crystal structure of a putative xylanase from bacteroides fragilis 56 c2p3eA_ not modelled 18.6 17 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus 57 d1vqoa2 not modelled 18.0 23 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 58 d1e3ia2 not modelled 17.9 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 59 d2rcfa1 not modelled 17.6 31 Fold:OB-fold Superfamily:EutN/CcmL-like Family:EutN/CcmL-like 60 c3bbnQ_ not modelled 17.5 27 PDB header:ribosome Chain: Q: PDB Molecule:ribosomal protein s17; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 61 c1knwA_ not modelled 17.4 17 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase 62 d1yb5a2 not modelled 17.4 38 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 63 d1p0fa2 not modelled 17.4 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 64 c1oy5B_ not modelled 17.0 18 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 65 c2a7yA_ not modelled 16.9 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rv2302/mt2359; PDBTitle: solution structure of the conserved hypothetical protein2 rv2302 from the bacterium mycobacterium tuberculosis 66 d2a7ya1 not modelled 16.9 30 Fold:SH3-like barrel Superfamily:Cell growth inhibitor/plasmid maintenance toxic component Family:Rv2302-like 67 d1oy5a_ not modelled 16.9 18 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 68 d1fr3a_ not modelled 16.8 11 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 69 c2yxxA_ not modelled 16.8 17 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) 70 d1twia1 not modelled 16.8 17 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 71 d1d1ta2 not modelled 16.8 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 72 d1t9ha1 not modelled 16.6 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 73 d1rkna_ not modelled 16.0 25 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 74 d1qora2 not modelled 15.9 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 75 d2q07a1 not modelled 15.8 23 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 76 d2uubq1 not modelled 15.5 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 77 c3rfuC_ not modelled 15.4 27 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase 78 d1gu7a2 not modelled 15.4 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 79 c1s1hQ_ not modelled 15.3 23 PDB header:ribosome Chain: Q: PDB Molecule:40s ribosomal protein s11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 80 c3knuD_ not modelled 15.1 27 PDB header:transferase Chain: D: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (guanine-n1)-methyltransferase from2 anaplasma phagocytophilum 81 d1f8fa2 not modelled 15.0 0 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 82 c3pcoD_ not modelled 14.9 27 PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp 83 d2qamc2 not modelled 14.6 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 84 d1p9pa_ not modelled 14.4 27 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 85 c3ky7A_ not modelled 14.2 27 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252 86 d1pl8a2 not modelled 14.1 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 87 c1vftA_ not modelled 14.0 9 PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of l-cycloserine-bound form of alanine2 racemase from d-cycloserine-producing streptomyces3 lavendulae 88 c3iefA_ not modelled 13.9 18 PDB header:transferase, rna binding protein Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna guanine-n1-methyltransferase from2 bartonella henselae using mpcs. 89 d1uala_ not modelled 13.8 27 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 90 d2jhfa2 not modelled 13.5 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 91 c1w4sA_ not modelled 13.5 50 PDB header:nuclear protein Chain: A: PDB Molecule:polybromo 1 protein; PDBTitle: crystal structure of the proximal bah domain of polybromo 92 c2zkqq_ not modelled 13.5 18 PDB header:ribosomal protein/rna Chain: Q: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 93 d1cdoa2 not modelled 13.3 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 94 c3mt1B_ not modelled 13.2 15 PDB header:lyase Chain: B: PDB Molecule:putative carboxynorspermidine decarboxylase protein; PDBTitle: crystal structure of putative carboxynorspermidine decarboxylase2 protein from sinorhizobium meliloti 95 c3n29A_ not modelled 12.9 8 PDB header:lyase Chain: A: PDB Molecule:carboxynorspermidine decarboxylase; PDBTitle: crystal structure of carboxynorspermidine decarboxylase complexed with2 norspermidine from campylobacter jejuni 96 d2qw7a1 not modelled 12.7 33 Fold:OB-fold Superfamily:EutN/CcmL-like Family:EutN/CcmL-like 97 c3smaD_ not modelled 12.7 26 PDB header:transferase Chain: D: PDB Molecule:frbf; PDBTitle: a new n-acetyltransferase fold in the structure and mechanism of the2 phosphonate biosynthetic enzyme frbf 98 c2dgyA_ not modelled 12.7 16 PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein 99 d1rcqa1 not modelled 12.7 18 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Alanine racemase