PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2e8gB_

Fold library id	PDB Header	Molecule	Title
c2e8gB_	PDB header: rna binding protein	Chain: B: PDB Molecule: hypothetical protein ph0536;	PDBTitle: the structure of protein from p. horikoshii at 1.7 angstrom2 resolution

Links to external resources
Added to library: Tue Mar 16 12:40:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M W D T S K D Y R L L V A E K S V E L F I R T I E G A K F R G Q W D K K R S I Q L A K E M I P D I Q A L R Y S Y I D P E E L V D T P Q M K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T
S S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L K E K A K G I I E A L G G E D W H H K F L S Q A S R E D R E K V E E Q V A R I K F F L N T I L N L D R R L K L G K I N D P V I A V D I V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T T
T T T T T
S
G G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G E V M S V G K H P S A D R L L V T N V N I G E R A V T V V T N D L T V K E G N R V A V A L L P P R N F F G I V S E G M F L G A G E G V L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S
S
T T
T T
T T
B
S S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence N V K G E I G G L P K G I P L E A L N E T R N A V E A F L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
B S
T T S
B S
G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	W	D	T	S	K	D	Y	R	L	L	V	A	E	K	S	V	E	L	F	I	R	T	I	E	G	A	K	F	R	G	Q	W	D	K	K	R	S	I	Q	L	A	K	E	M	I	P	D	I	Q	A	L	R	Y	S	Y	I	D	P	E	E	L	V	D	T	P	Q	M	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G																				T					S	S																						T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	K	E	K	A	K	G	I	I	E	A	L	G	G	E	D	W	H	H	K	F	L	S	Q	A	S	R	E	D	R	E	K	V	E	E	Q	V	A	R	I	K	F	F	L	N	T	I	L	N	L	D	R	R	L	K	L	G	K	I	N	D	P	V	I	A	V	D	I	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	T	T							T	T			T	T	T																				T							T		S				G	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	E	V	M	S	V	G	K	H	P	S	A	D	R	L	L	V	T	N	V	N	I	G	E	R	A	V	T	V	V	T	N	D	L	T	V	K	E	G	N	R	V	A	V	A	L	L	P	P	R	N	F	F	G	I	V	S	E	G	M	F	L	G	A	G	E	G	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		T	T									S	S								S		T	T			T	T														T	T									B		S	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	N	V	K	G	E	I	G	G	L	P	K	G	I	P	L	E	A	L	N	E	T	R	N	A	V	E	A	F	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		B	S		T	T	S			B	S			G	G	G	G