Fold library entry viewer: c3j09A_

Added to library: Sat Aug 27 10:55:44 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	M	E	R	T	V	R	V	T	G	M	T	C	A	M	C	V	K	S	I	E	T	A	V	G	S	L	E	G	V	E	E	V	R	V	N	L	A	T	E	T	A	F	I	R	F	D	E	K	R	I	D	F	E	T	I	K	R	V	I	E	D	L	G	Y	G	V	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S													T	S	T	T								T	T	T	T								T	T	T																		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	A	A	V	S	A	E	V	E	H	L	S	R	M	K	R	K	L	Y	V	A	A	F	A	G	V	L	L	L	F	L	A	H	F	I	S	L	P	Y	E	D	F	V	Q	L	L	I	A	L	P	A	I	F	Y	S	G	S	S	I	F	K	A	A	F	S	A	L	R	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S				S	S	S	T	T	T	T								T	T	S	S		S	S	S	S			S			S	T																T			T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	L	N	M	D	V	M	Y	S	M	G	V	G	A	A	F	L	A	S	V	L	S	T	A	G	V	L	P	R	E	Y	S	F	Y	E	T	S	V	L	L	L	A	F	L	L	L	G	R	T	L	E	A	R	A	K	S	R	T	G	E	A	I	K	K	L	V	G	L	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S		S	S		S																T	T	T	T							T	T																				T	T				T	T						T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	T	A	V	V	I	R	D	G	K	E	I	A	V	P	V	E	E	V	A	V	G	D	I	V	I	V	R	P	G	E	K	I	P	V	D	G	V	V	V	E	G	E	S	Y	V	D	E	S	M	I	S	G	E	P	V	P	V	L	K	S	K	G	D	E	V	F	G	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T	T							G	G	G			T	T							T	T		B			S																				S	S						T	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	N	N	T	G	V	L	K	I	R	A	T	R	V	G	G	E	T	L	L	A	Q	I	V	K	L	V	E	D	A	M	G	S	K	P	P	I	Q	R	L	A	D	K	V	V	A	Y	F	I	P	T	V	L	L	V	A	I	S	A	F	I	Y	W	Y	F	I	A	H	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S										G	G	G	S										S	S	S			S																												T	T	S		S	S	T	T		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	L	F	A	F	T	T	L	I	A	V	L	V	V	A	C	P	C	A	F	G	L	A	T	P	T	A	L	T	V	G	M	G	K	G	A	E	L	G	I	L	I	K	N	A	D	A	L	E	V	A	E	K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S												S		T	T																		T	T	T				S	S	T	T					G	G	G												T	S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	V	T	D	L	V	P	L	N	G	D	E	R	E	L	L	R	L	A	A	I	A	E	R	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H	G	I	E	L	G	E	P	E	K	V	E	V	I	A	G	E	G	V	V	A	D	G	I	L	V	G	N	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S														T	T			S													T	T					S								T	T	T					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	M	E	D	F	G	V	A	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	M	G	I	K	V	G	M	I	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																T	T	T									T	T												S		T	T											T	T								S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	K	E	V	V	A	F	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	G	S	G	S	D	V	A	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S					S			T	T										T	T	T									S	S	T	T							S	S									S			S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q	L	S	R	K	T	M	S	K	I	K	Q	N	I	F	W	A	L	I	Y	N	V	I	L	I	P	A	A	A	G	L	L	Y	P	I	F	G	V	V	F	R	P	E	F	A	G	L	A	M	A	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S	S			T	T																																					T	T	S	S					S												T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Sequence	S	V	S	V	V	A	N	S	L	L	L	R	N	Y	V	P	P	I	R	R	G	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S					S		S	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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