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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2dbiA_

Fold library idPDB HeaderMoleculeTitle
c2dbiA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein ybiu;PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli


Added to library: Tue Mar 16 14:23:56 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGH
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Known secondary structure (DSSP)



SS

SSS
TT


S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYPEIYPIYWSQAQMQARQSEEMANA
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Known secondary structure (DSSP)

STSS
TT






TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSFLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGN
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Known secondary structure (DSSP) TTSB
TT









TT

B


S
ST
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAQYDPWHAAHRTEVEEYTVKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDEL
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Known secondary structure (DSSP) GGG

TTB
TTGGG








S

SSS
B
TTSS

S
TTGGGSTTS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence CGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNL
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Known secondary structure (DSSP) TT

TTS


TTT
TT



B
TT
TT



BSS

S




B
S
 .........360.........370.........380.........390.......
Sequence AYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGM
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Known secondary structure (DSSP) T


TTS
S

GGGG
SS


GGG

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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