Email l.a.kelley@imperial.ac.uk Description P65298 Date Wed Jan 25 15:21:00 GMT 2012 Unique Job ID cbf4070c793bcc8c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1jccC_ 99.9 43 PDB header:membrane protein Chain: C: PDB Molecule:major outer membrane lipoprotein; PDBTitle: crystal structure of a novel alanine-zipper trimer at 1.7 a2 resolution, v13a,l16a,v20a,l23a,v27a,m30a,v34a mutations 2 c1t8zA_ 99.6 35 PDB header:membrane protein Chain: A: PDB Molecule:major outer membrane lipoprotein; PDBTitle: atomic structure of a novel tryptophan-zipper pentamer 3 d2gr7a1 79.5 21 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 4 c2gr7C_ 79.5 21 PDB header:membrane protein Chain: C: PDB Molecule:adhesin; PDBTitle: hia 992-1098 5 c2v7iA_ 77.1 21 PDB header:biosynthetic protein Chain: A: PDB Molecule:prnb; PDBTitle: prnb native 6 d1zeea1 76.4 19 Fold:Indolic compounds 2,3-dioxygenase-like Superfamily:Indolic compounds 2,3-dioxygenase-like Family:Indoleamine 2,3-dioxygenase-like 7 c2diuA_ 66.3 32 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rrm domain of kiaa0430 protein 8 c3sjbC_ 61.1 20 PDB header:hydrolase/transport protein Chain: C: PDB Molecule:golgi to er traffic protein 1; PDBTitle: crystal structure of s. cerevisiae get3 in the open state in complex2 with get1 cytosolic domain 9 c1ci6B_ 55.7 28 PDB header:transcription Chain: B: PDB Molecule:transcription factor c/ebp beta; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 10 c1by0A_ 45.7 35 PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen 11 c3sjaG_ 45.6 23 PDB header:hydrolase/transport protein Chain: G: PDB Molecule:golgi to er traffic protein 1; PDBTitle: crystal structure of s. cerevisiae get3 in the open state in complex2 with get1 cytosolic domain 12 c1fosF_ 43.3 27 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 13 c1j1dF_ 42.2 16 PDB header:contractile protein Chain: F: PDB Molecule:troponin i; PDBTitle: crystal structure of the 46kda domain of human cardiac2 troponin in the ca2+ saturated form 14 c2pohA_ 38.0 17 PDB header:viral protein Chain: A: PDB Molecule:head completion protein; PDBTitle: structure of phage p22 tail needle gp26 15 c3na7A_ 35.5 18 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 16 c2gl2B_ 35.1 21 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 17 c2akfB_ 35.0 29 PDB header:protein binding Chain: B: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 18 c2akfA_ 35.0 29 PDB header:protein binding Chain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 19 c2akfC_ 35.0 29 PDB header:protein binding Chain: C: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 20 c1avyA_ 34.4 8 PDB header:coiled coil Chain: A: PDB Molecule:fibritin; PDBTitle: fibritin deletion mutant m (bacteriophage t4) 21 c3m9bK_ not modelled 33.6 26 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 22 c2ykqC_ not modelled 33.2 17 PDB header:rna-binding protein Chain: C: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p trimer 23 c3ipdB_ not modelled 33.1 11 PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21 24 c2eqbC_ not modelled 32.9 14 PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex 25 c3u59C_ not modelled 32.4 11 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 26 c3emoA_ not modelled 32.3 19 PDB header:membrane protein/cell adhesion Chain: A: PDB Molecule:hia (adhesin); PDBTitle: crystal structure of transmembrane hia 973-1098 27 c1ytzI_ not modelled 32.1 9 PDB header:contractile protein Chain: I: PDB Molecule:troponin i; PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 activated state 28 c2hpcF_ not modelled 28.7 14 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 29 c2w83C_ not modelled 28.3 21 PDB header:protein transport Chain: C: PDB Molecule:c-jun-amino-terminal kinase-interacting protein PDBTitle: crystal structure of the arf6 gtpase in complex with a2 specific effector, jip4 30 c1j1eC_ not modelled 27.6 16 PDB header:contractile protein Chain: C: PDB Molecule:troponin i; PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form 31 c1deqO_ not modelled 27.3 8 PDB header: PDB COMPND: 32 c2qa7B_ not modelled 26.7 28 PDB header:actin binding Chain: B: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi) 33 c1coiA_ not modelled 26.6 50 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 34 c1bb1B_ not modelled 26.3 36 PDB header:de novo protein design Chain: B: PDB Molecule:designed, thermostable heterotrimeric coiled PDBTitle: crystal structure of a designed, thermostable2 heterotrimeric coiled coil 35 c1yv0I_ not modelled 22.6 9 PDB header:contractile protein Chain: I: PDB Molecule:troponin i, fast skeletal muscle; PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state 36 c1gd2G_ not modelled 21.6 19 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 37 c1ei3E_ not modelled 20.7 8 PDB header: PDB COMPND: 38 c2x7aB_ not modelled 19.4 23 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 39 c2d3eD_ not modelled 19.3 19 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 40 c2wt7B_ not modelled 19.2 19 PDB header:transcription Chain: B: PDB Molecule:transcription factor mafb; PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna 41 c3p8cF_ not modelled 18.4 23 PDB header:protein binding Chain: F: PDB Molecule:abl interactor 2; PDBTitle: structure and control of the actin regulatory wave complex 42 c2efrB_ not modelled 18.1 23 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 43 c2ld7B_ not modelled 17.5 29 PDB header:transcription Chain: B: PDB Molecule:paired amphipathic helix protein sin3a; PDBTitle: solution structure of the msin3a pah3-sap30 sid complex 44 d1cxzb_ not modelled 17.4 11 Fold:Long alpha-hairpin Superfamily:HR1 repeat Family:HR1 repeat 45 c2npsD_ not modelled 16.7 13 PDB header:transport protein Chain: D: PDB Molecule:syntaxin-6; PDBTitle: crystal structure of the early endosomal snare complex 46 c3u1aC_ not modelled 16.5 17 PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha 47 c1deqD_ not modelled 16.4 19 PDB header: PDB COMPND: 48 d1nkpb_ not modelled 16.2 19 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 49 c3bvhE_ not modelled 15.2 27 PDB header:blood clotting Chain: E: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide 50 c3ghgK_ not modelled 15.1 12 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 51 c3gwnA_ not modelled 15.1 31 PDB header:oxidoreductase Chain: A: PDB Molecule:probable fad-linked sulfhydryl oxidase r596; PDBTitle: crystal structure of the fad binding domain from mimivirus sulfhydryl2 oxidase r596 52 c3okqA_ not modelled 15.1 20 PDB header:protein binding Chain: A: PDB Molecule:bud site selection protein 6; PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6 53 c2ki0A_ not modelled 15.0 38 PDB header:de novo protein Chain: A: PDB Molecule:ds119; PDBTitle: nmr structure of a de novo designed beta alpha beta 54 c3b5nF_ not modelled 14.8 7 PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex 55 c2npsB_ not modelled 14.6 13 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 13; PDBTitle: crystal structure of the early endosomal snare complex 56 c1ci6A_ not modelled 14.4 19 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 57 c3hizB_ not modelled 14.1 14 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 58 c1a92B_ not modelled 14.0 35 PDB header:leucine zipper Chain: B: PDB Molecule:delta antigen; PDBTitle: oligomerization domain of hepatitis delta antigen 59 c2e43A_ not modelled 13.9 17 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 60 c3mkxC_ not modelled 13.5 23 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 61 c1fosE_ not modelled 13.1 11 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 62 c1t3jA_ not modelled 12.9 19 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 63 d1fxkc_ not modelled 12.7 21 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 64 c3eukC_ not modelled 12.5 17 PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer 65 c2qihA_ not modelled 12.2 17 PDB header:cell adhesion Chain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis 66 c2fxmB_ not modelled 12.1 21 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 67 c2xdjF_ not modelled 11.0 22 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 68 c2js5B_ not modelled 10.7 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: nmr structure of protein q60c73_metca. northeast structural2 genomics consortium target mcr1 69 c1qu7A_ not modelled 10.6 9 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor 70 c3a5tB_ not modelled 10.5 14 PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex 71 d1slqa_ not modelled 10.4 29 Fold:VP4 membrane interaction domain Superfamily:VP4 membrane interaction domain Family:VP4 membrane interaction domain 72 c3hnwB_ not modelled 10.4 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 73 c1deqF_ not modelled 10.3 16 PDB header: PDB COMPND: 74 d1r05a_ not modelled 10.2 26 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 75 d2azeb1 not modelled 10.1 13 Fold:E2F-DP heterodimerization region Superfamily:E2F-DP heterodimerization region Family:E2F dimerization segment 76 c3dbzB_ not modelled 10.0 21 PDB header:sugar binding protein Chain: B: PDB Molecule:pulmonary surfactant-associated protein d; PDBTitle: human surfactant protein d 77 c1ce0B_ not modelled 9.9 19 PDB header:hiv-1 envelope protein Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model 78 d1nlwa_ not modelled 9.8 17 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 79 c3layF_ not modelled 9.5 16 PDB header:metal binding protein Chain: F: PDB Molecule:zinc resistance-associated protein; PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2 80 c1gk6B_ not modelled 9.3 18 PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) 81 c2wukD_ not modelled 9.1 14 PDB header:cell cycle Chain: D: PDB Molecule:septum site-determining protein diviva; PDBTitle: diviva n-terminal domain, f17a mutant 82 c1rb6C_ not modelled 8.9 30 PDB header:dna binding protein Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form 83 c1swiA_ not modelled 8.9 30 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4p1; PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene 84 c1ij3B_ not modelled 8.4 30 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 85 c1sfcD_ not modelled 8.4 17 PDB header:transport protein Chain: D: PDB Molecule:protein (snap-25b); PDBTitle: neuronal synaptic fusion complex 86 c1t2kD_ not modelled 8.3 19 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 87 c3g9rF_ not modelled 8.3 32 PDB header:viral protein Chain: F: PDB Molecule:fusion complex of hiv-1 envelope glycoprotein PDBTitle: structure of the hiv-1 gp41 membrane-proximal ectodomain2 region in a putative prefusion conformation 88 c2d4yA_ not modelled 8.3 25 PDB header:structural protein Chain: A: PDB Molecule:flagellar hook-associated protein 1; PDBTitle: crystal structure of a 49k fragment of hap1 (flgk) 89 c2xnxM_ not modelled 8.3 33 PDB header:cell adhesion Chain: M: PDB Molecule:m protein; PDBTitle: bc1 fragment of streptococcal m1 protein in complex with human2 fibrinogen 90 c1g2cN_ not modelled 8.2 19 PDB header:viral protein Chain: N: PDB Molecule:fusion protein (f); PDBTitle: human respiratory syncytial virus fusion protein core 91 c3gwlB_ not modelled 8.2 24 PDB header:oxidoreductase Chain: B: PDB Molecule:fad-linked sulfhydryl oxidase; PDBTitle: crystal structure of asfv pb119l, a viral sulfhydryl oxidase 92 c1n73C_ not modelled 8.1 18 PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 93 c1ij2C_ not modelled 8.0 28 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 94 c1l4aD_ not modelled 7.9 13 PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei 95 c1rb1A_ not modelled 7.9 28 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 96 c1rb1B_ not modelled 7.9 28 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 97 c3k7zA_ not modelled 7.9 28 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 98 c3k7zB_ not modelled 7.9 28 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 99 c2ke4A_ not modelled 7.8 16 PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4