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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1slqa_

Fold library idFoldSuperfamilyFamily
d1slqa_VP4 membrane interaction domainVP4 membrane interaction domainVP4 membrane interaction domain


Added to library: Tue Mar 16 13:56:56 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DIVVSKTSLWKEMQYNRDITIRFKFASSIVKSGGLGYKWSEISFKPANYQYTYTRDGEEVTAHTTCSVNG
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Known secondary structure (DSSP)
TT





STTS



SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MNDFNFNGGSLPTDFVISRYEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNSVICTGGDYSFALPVG
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Known secondary structure (DSSP)


SSTTS

TT
SSTTTTT








SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QWPVMTGGAVSLHSAGVTLSTQFTDFVSLNSLRFRFRLTVEEPSFSITRTRVSRLYGLPAANPNNGKEYY
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Known secondary structure (DSSP)





SSB
S


TTSS




BSSSSSTT
S
 .........220.........230.........240.........250.........260.........270
Sequence EVAGRFSLISLVPSNDDYQTPITNSVTVRQDLERQLGELREEFNALSQEIAMSQLIDLAL
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Known secondary structure (DSSP) S







B





TTTTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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