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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2d4yA_

Fold library idPDB HeaderMoleculeTitle
c2d4yA_PDB header: structural proteinChain: A: PDB Molecule: flagellar hook-associated protein 1;PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)


Added to library: Tue Mar 16 13:18:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKA
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Known secondary structure (DSSP)

TTT
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLNDQISRMTNDLLDQRDQLVSELNKIVGV
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Known secondary structure (DSSP)

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVSVQDGGTYNLTMANGYTLVQGSTARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLT
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Known secondary structure (DSSP) TTTTT

TT


SS
TT
TTT

GGGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FRSQDLDQTRNTLGQLALAFADAFNAQHTKGYDADGNKGKDFFSIGSPVVYSNSNNADKTVSLTAKVVDS
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Known secondary structure (DSSP) TTTSB
TTS
B








TTSS
TT


S
G
 .........290.........300.........310.........320.........330.........340.........350
Sequence TKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEIDGLKVTVGTGAQKNDSFLLKPVSNAIVDMN
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Known secondary structure (DSSP) GG

SS

SSSTTT



TTS
TT

S


TTSSTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKVTNEAEIAMASESKLSDNRNGQALLDLQNSNVVGGNKTFNDAYATLVSDVGNKTSTLKTSSTTQANVV
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Known secondary structure (DSSP)



GGG


BSS





GGGGS

BTTTB
 .........
Sequence KQLYKQQQS
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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