Email l.a.kelley@imperial.ac.uk Description P23874 Date Wed Jan 25 15:20:44 GMT 2012 Unique Job ID be1356fc9c8052a5

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3dntB_ 100.0 98 PDB header:transferase Chain: B: PDB Molecule:protein hipa; PDBTitle: structures of mdt proteins 2 c3akjB_ 100.0 14 PDB header:transferase Chain: B: PDB Molecule:ctka; PDBTitle: crystal structure of a helicobacter pylori proinflammatory kinase ctka 3 d1cjaa_ 95.1 14 Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Actin-fragmin kinase, catalytic domain 4 c3attA_ 35.5 11 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rv3168 with atp 5 d2je8a4 33.7 14 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 6 d1bhga2 31.4 19 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 7 d1jz8a3 30.8 18 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 8 d1yq2a3 29.2 18 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 9 c3fn9B_ 26.1 23 PDB header:hydrolase Chain: B: PDB Molecule:putative beta-galactosidase; PDBTitle: crystal structure of putative beta-galactosidase from bacteroides2 fragilis 10 d2vzsa4 25.0 12 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain 11 c3bgaB_ 23.1 14 PDB header:hydrolase Chain: B: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of beta-galactosidase from bacteroides2 thetaiotaomicron vpi-5482 12 d1eucb2 23.1 23 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Succinyl-CoA synthetase, beta-chain, N-terminal domain 13 c3gm8A_ 23.0 31 PDB header:hydrolase Chain: A: PDB Molecule:glycoside hydrolase family 2, candidate beta-glycosidase; PDBTitle: crystal structure of a beta-glycosidase from bacteroides vulgatus 14 c3cmgA_ 22.5 15 PDB header:hydrolase Chain: A: PDB Molecule:putative beta-galactosidase; PDBTitle: crystal structure of putative beta-galactosidase from bacteroides2 fragilis 15 d1iowa2 22.0 24 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 16 d1uc8a2 20.1 15 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Lysine biosynthesis enzyme LysX ATP-binding domain 17 d2nu7b2 19.2 27 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Succinyl-CoA synthetase, beta-chain, N-terminal domain 18 c3obaA_ 19.0 18 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: structure of the beta-galactosidase from kluyveromyces lactis 19 c3lpgA_ 18.8 36 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:beta-glucuronidase; PDBTitle: structure of e. coli beta-glucuronidase bound with a novel, potent2 inhibitor 3-(2-fluorophenyl)-1-(2-hydroxyethyl)-1-((6-methyl-2-oxo-1,3 2-dihydroquinolin-3-yl)methyl)urea 20 c2vzvB_ 18.8 12 PDB header:hydrolase Chain: B: PDB Molecule:exo-beta-d-glucosaminidase; PDBTitle: substrate complex of amycolatopsis orientalis exo-2 chitosanase csxa e541a with chitosan 21 c3ln7A_ not modelled 18.2 19 PDB header:ligase Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab; PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida 22 c1jz6C_ not modelled 17.6 18 PDB header:hydrolase Chain: C: PDB Molecule:beta-galactosidase; PDBTitle: e. coli (lacz) beta-galactosidase in complex with galacto-2 tetrazole 23 d1e4ea2 not modelled 16.9 25 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 24 c3mv14_ not modelled 16.1 18 PDB header:hydrolase Chain: 4: PDB Molecule:beta-galactosidase; PDBTitle: e.coli (lacz) beta-galactosidase (r599a) in complex with guanidinium 25 c3oq9C_ not modelled 15.2 17 PDB header:apoptosis Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly 26 c1yq2C_ not modelled 14.6 18 PDB header:hydrolase Chain: C: PDB Molecule:beta-galactosidase; PDBTitle: beta-galactosidase from arthrobacter sp. c2-2 (isoenzyme c2-2 2-1) 27 d1ddfa_ not modelled 14.5 12 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 28 c3cqbB_ not modelled 14.1 13 PDB header:hydrolase Chain: B: PDB Molecule:probable protease htpx homolog; PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633 29 c3ln6A_ not modelled 13.6 10 PDB header:ligase Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab; PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae 30 d1kjqa3 not modelled 13.4 27 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 31 c1bhgB_ not modelled 12.3 23 PDB header:glycosidase Chain: B: PDB Molecule:beta-glucuronidase; PDBTitle: human beta-glucuronidase at 2.6 a resolution 32 c3tqtB_ not modelled 11.8 15 PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii 33 c2ddcA_ not modelled 11.8 14 PDB header:luminescent protein Chain: A: PDB Molecule:photoconvertible fluorescent protein; PDBTitle: unique behavior of a histidine responsible for an2 engineered green-to-red photoconversion process 34 d1ehia2 not modelled 11.6 10 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 35 d3etja3 not modelled 11.6 14 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 36 c1ehiB_ not modelled 11.4 12 PDB header:ligase Chain: B: PDB Molecule:d-alanine:d-lactate ligase; PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides 37 c1wr2A_ not modelled 10.9 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1789; PDBTitle: crystal structure of ph1788 from pyrococcus horikoshii ot3 38 c2otbB_ not modelled 10.9 16 PDB header:fluorescent protein Chain: B: PDB Molecule:gfp-like fluorescent chromoprotein cfp484; PDBTitle: crystal structure of a monomeric cyan fluorescent protein2 in the fluorescent state 39 d1tg7a2 not modelled 10.5 27 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Beta-galactosidase LacA, domains 4 and 5 40 d1moua_ not modelled 10.4 14 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 41 c3da4B_ not modelled 10.2 39 PDB header:antibiotic Chain: B: PDB Molecule:colicin-m; PDBTitle: crystal structure of colicin m, a novel phosphatase2 specifically imported by escherichia coli 42 d1ggxa_ not modelled 10.2 12 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 43 d1icha_ not modelled 10.1 8 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 44 c1ichA_ not modelled 10.1 8 PDB header:apoptosis Chain: A: PDB Molecule:tumor necrosis factor receptor-1; PDBTitle: solution structure of the tumor necrosis factor receptor-12 death domain 45 c2rcyB_ not modelled 10.1 13 PDB header:oxidoreductase Chain: B: PDB Molecule:pyrroline carboxylate reductase; PDBTitle: crystal structure of plasmodium falciparum pyrroline carboxylate2 reductase (mal13p1.284) with nadp bound 46 c3cglE_ not modelled 9.7 13 PDB header:fluorescent protein Chain: E: PDB Molecule:gfp-like fluorescent chromoprotein dsfp483; PDBTitle: crystal structure and raman studies of dsfp483, a cyan fluorescent2 protein from discosoma striata 47 d2cg4a1 not modelled 9.7 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 48 c3i12A_ not modelled 9.7 15 PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2 49 c3riwA_ not modelled 9.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:ascorbate peroxidase; PDBTitle: the crystal structure of leishmania major peroxidase mutant c197t 50 c2z04A_ not modelled 8.8 21 PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus 51 c2z6zA_ not modelled 8.8 15 PDB header:fluorescent protein Chain: A: PDB Molecule:fluorescent protein dronpa; PDBTitle: crystal structure of a photoswitchable gfp-like protein2 dronpa in the bright-state 52 c3ls1A_ not modelled 8.5 15 PDB header:photosynthesis Chain: A: PDB Molecule:sll1638 protein; PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+ 53 c2je8B_ not modelled 8.5 9 PDB header:hydrolase Chain: B: PDB Molecule:beta-mannosidase; PDBTitle: structure of a beta-mannosidase from bacteroides2 thetaiotaomicron 54 c3r23B_ not modelled 8.3 11 PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis 55 d1uisa_ not modelled 8.2 14 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 56 c2nu9E_ not modelled 8.1 29 PDB header:ligase Chain: E: PDB Molecule:succinyl-coa synthetase beta chain; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase2 orthorhombic crystal form 57 c3se7A_ not modelled 8.0 15 PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana 58 c3lwbA_ not modelled 7.9 16 PDB header:ligase Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl) from2 mycobacterium tuberculosis 59 d1zyla1 not modelled 7.8 9 Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:APH phosphotransferases 60 d1h5wa_ not modelled 7.7 13 Fold:Upper collar protein gp10 (connector protein) Superfamily:Upper collar protein gp10 (connector protein) Family:Upper collar protein gp10 (connector protein) 61 d3buxb2 not modelled 7.7 30 Fold:N-cbl like Superfamily:N-terminal domain of cbl (N-cbl) Family:N-terminal domain of cbl (N-cbl) 62 c1ijgE_ not modelled 7.6 13 PDB header:viral protein Chain: E: PDB Molecule:upper collar protein; PDBTitle: structure of the bacteriophage phi29 head-tail connector2 protein 63 d2cyya1 not modelled 7.5 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 64 d1z67a1 not modelled 7.5 9 Fold:YidB-like Superfamily:YidB-like Family:YidB-like 65 c2icrD_ not modelled 7.4 17 PDB header:fluorescent protein Chain: D: PDB Molecule:red fluorescent protein zoanrfp; PDBTitle: red fluorescent protein zrfp574 from zoanthus sp. 66 d1i1ga1 not modelled 7.3 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 67 c2pvpB_ not modelled 7.3 26 PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori 68 c2i80B_ not modelled 7.2 12 PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies 69 c2c9iG_ not modelled 7.0 18 PDB header:luminescent protein Chain: G: PDB Molecule:green fluorescent protein asfp499; PDBTitle: structure of the fluorescent protein asfp499 from anemonia2 sulcata 70 c1e4eB_ not modelled 6.9 20 PDB header:ligase Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana; PDBTitle: d-alanyl-d-lacate ligase 71 c3nezB_ not modelled 6.9 12 PDB header:fluorescent protein Chain: B: PDB Molecule:mrojoa; PDBTitle: mrojoa 72 d1re0b_ not modelled 6.6 19 Fold:alpha-alpha superhelix Superfamily:Sec7 domain Family:Sec7 domain 73 d1e0ea_ not modelled 6.3 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 74 d2rh7a1 not modelled 6.3 8 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 75 c1rr7A_ not modelled 6.2 6 PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu 76 d1rr7a_ not modelled 6.2 6 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Middle operon regulator, Mor 77 c2w48D_ not modelled 6.2 18 PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae 78 d1bc9a_ not modelled 6.2 25 Fold:alpha-alpha superhelix Superfamily:Sec7 domain Family:Sec7 domain 79 c1eucB_ not modelled 6.1 24 PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase 80 d2ahra1 not modelled 6.1 15 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:ProC C-terminal domain-like 81 c2zo7A_ not modelled 6.1 18 PDB header:luminescent protein Chain: A: PDB Molecule:cyan/green-emitting gfp-like protein, kusabira-cyan mutant PDBTitle: crystal structure of a kusabira-cyan mutant (kcy-r1), a cyan/green-2 emitting gfp-like protein 82 c2l4aA_ not modelled 6.1 13 PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp 83 c3op0B_ not modelled 6.0 14 PDB header:signaling protein/signaling protein regu Chain: B: PDB Molecule:signal transduction protein cbl-c; PDBTitle: crystal structure of cbl-c (cbl-3) tkb domain in complex with egfr2 py1069 peptide 84 c2a8vA_ not modelled 6.0 24 PDB header:protein/rna Chain: A: PDB Molecule:rna binding domain of rho transcription PDBTitle: rho transcription termination factor/rna complex 85 d2j9ga3 not modelled 5.9 12 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 86 d1uptd_ not modelled 5.9 14 Fold:GRIP domain Superfamily:GRIP domain Family:GRIP domain 87 c2zdqA_ not modelled 5.8 11 PDB header:ligase Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8 88 c2dlnA_ not modelled 5.8 19 PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution 89 d1xsza1 not modelled 5.8 31 Fold:alpha-alpha superhelix Superfamily:Sec7 domain Family:Sec7 domain 90 d1ojra_ not modelled 5.7 18 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase 91 c2ib5H_ not modelled 5.7 10 PDB header:luminescent protein Chain: H: PDB Molecule:chromo protein; PDBTitle: structural characterization of a blue chromoprotein and its yellow2 mutant from the sea anemone cnidopus japonicus 92 c3jr1A_ not modelled 5.6 12 PDB header:transferase Chain: A: PDB Molecule:putative fructosamine-3-kinase; PDBTitle: crystal structure of putative fructosamine-3-kinase2 (yp_719053.1) from haemophilus somnus 129pt at 2.32 a3 resolution 93 d1p1ma1 not modelled 5.6 10 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:SAH/MTA deaminase-like 94 c2jpmA_ not modelled 5.6 33 PDB header:antimicrobial protein Chain: A: PDB Molecule:bacteriocin lactococcin-g subunit beta; PDBTitle: lactococcin g-b in tfe 95 c2vbzA_ not modelled 5.6 4 PDB header:dna-binding protein Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan 96 d1dwka1 not modelled 5.6 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Cyanase N-terminal domain 97 d1ku1a_ not modelled 5.6 19 Fold:alpha-alpha superhelix Superfamily:Sec7 domain Family:Sec7 domain 98 c2iifA_ not modelled 5.5 17 PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor; PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna 99 c3ls8A_ not modelled 5.5 23 PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol 3-kinase catalytic subunit PDBTitle: crystal structure of human pik3c3 in complex with 3-[4-(4-2 morpholinyl)thieno[3,2-d]pyrimidin-2-yl]-phenol