Fold library entry viewer: c2vzvB_

Added to library: Tue Mar 16 12:05:37 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	S	V	G	A	A	A	G	N	A	T	P	I	P	G	Y	V	I	Q	S	S	A	Q	V	S	D	D	S	A	V	S	K	P	G	F	P	T	S	G	W	Y	P	V	S	S	R	S	T	V	Y	A	G	L	L	Q	N	G	K	Y	A	D	P	F	Y	S	T	N	M	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B					T	T													G	G	G		S		G	G	G	T	T	S	T	T				T	T						S	S										T	T		S			T	T	S	T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	P	A	A	Q	F	S	V	P	W	W	Y	R	T	D	L	N	V	D	D	T	S	S	R	T	Y	L	D	F	S	G	V	L	S	K	A	D	V	W	V	N	G	T	K	V	A	T	K	D	Q	V	N	G	A	Y	T	R	H	D	L	D	I	T	A	Q	V	H	T	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	G	G	G	G	S											S		T	T	S											S	B						T	T						T	T	T	S	B	S	T	T								T	T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	S	V	A	F	K	V	Y	P	N	D	P	N	R	D	L	S	M	G	W	I	D	W	A	Q	T	P	P	D	Q	N	M	G	I	V	R	D	V	L	V	R	R	S	G	A	V	A	L	R	S	A	H	V	I	Q	K	L	N	S	A	L	D	H	A	D	L	T	V	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	S	S	S				T	T	T	S				T	T	T	T					S								S	S														T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	V	R	N	D	S	A	N	A	V	Q	T	T	V	A	G	T	V	A	G	K	P	I	S	Q	T	V	S	L	A	A	K	E	R	K	T	V	T	F	P	L	V	G	L	D	R	P	N	V	W	W	P	A	G	M	G	G	Q	H	R	Y	D	L	D	L	T	A	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S											T	T											T	T														S							T	T	S	S														T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	T	P	S	D	A	A	K	S	K	F	G	V	R	D	V	K	A	T	L	N	S	S	G	G	R	Q	Y	S	V	N	G	K	P	L	L	I	R	G	G	G	Y	T	P	D	L	F	L	R	W	N	E	T	A	A	A	D	K	L	K	Y	V	L	N	L	G	L	N	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																					T	T	S							T	T														T	T																		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	L	E	G	H	I	E	P	D	E	F	F	D	I	A	D	D	L	G	V	L	T	M	P	G	W	E	C	C	D	K	W	E	G	Q	V	N	G	E	E	K	G	E	P	W	V	E	S	D	Y	P	I	A	K	A	S	M	F	S	E	A	E	R	L	R	D	H	P	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S															T									S	S	S	G	G	G	T	T	T		T	T	S	S	S					T	T																	T	T		T	T	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	S	F	H	I	G	S	D	F	A	P	D	R	R	I	E	Q	G	Y	L	D	A	M	K	A	A	D	F	L	L	P	V	I	P	A	A	S	A	R	P	S	P	I	T	G	A	S	G	M	K	M	N	G	P	Y	D	Y	V	P	P	V	Y	W	Y	D	K	S	Q	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S	S																	T	T			S				S		S	S	S			B	T	T	T	B											S				G	G	G	G	G			S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	G	G	A	W	S	F	N	S	A	T	S	A	G	V	D	I	P	T	M	D	T	L	K	R	M	M	S	A	S	E	L	D	T	M	W	K	N	P	S	A	K	Q	Y	H	R	S	S	S	D	T	F	G	N	L	K	L	F	G	D	A	L	T	K	R	Y	G	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	S									S	B												S												T	T	S	B		T	T	S		S	S	G	G	G	S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	L	N	D	F	V	R	K	A	Q	L	S	Q	Y	E	N	V	R	A	E	F	E	S	H	S	R	N	Y	T	D	S	T	N	P	S	T	G	L	I	Y	W	M	L	N	S	P	W	T	S	L	H	W	Q	L	F	D	A	Y	M	D	Q	N	G	A	Y	Y	G	A	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																											T	T		S	S	S								S		S			S	S	S		S	B	S		S	B		T	T			B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	N	E	P	L	H	I	Q	Y	S	H	D	N	R	S	V	V	V	I	N	Q	T	S	N	A	V	S	G	L	T	A	T	T	K	L	Y	N	L	D	G	T	E	K	Y	S	N	T	K	T	G	L	S	V	G	A	L	G	A	K	A	T	A	V	T	V	P	A	V	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		S							T	T	T									S	S	S														T	T	S															S	S	S												T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	S	T	T	Y	L	A	K	N	V	L	T	D	S	S	G	K	E	V	S	R	N	V	Y	W	L	S	T	K	A	D	T	L	N	W	G	G	S	D	W	Y	Y	T	P	Q	S	A	F	A	D	L	S	G	L	N	N	L	G	Q	S	A	V	G	A	T	A	N	S	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											T	T													S	S						G	G	G			S	S											G	G	G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	A	D	G	T	T	T	T	T	V	T	L	K	N	T	S	G	G	R	L	P	A	F	Y	V	D	S	K	V	V	D	S	A	G	K	P	V	L	P	V	E	W	N	D	N	A	V	S	L	W	P	G	E	T	T	T	L	T	A	K	Y	R	T	A	D	L	K	G	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S													S	S	S													T	T	S		B		S	S				S	S		S					T	T											G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Sequence	P	S	V	R	I	S	G	W	N	T	G	T	Q	T	V	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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