PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ib5H_

Fold library id	PDB Header	Molecule	Title
c2ib5H_	PDB header: luminescent protein	Chain: H: PDB Molecule: chromo protein;	PDBTitle: structural characterization of a blue chromoprotein and its2 yellow mutant from the sea anemone cnidopus japonicus

Links to external resources
Added to library: Tue Mar 16 13:08:02 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I S D N V R I K L Y X E G T V N N H H F X C E A E G E G K P Y E G T Q X E N I K V T K G G P L P F S F D I L T P N C S V A I T K Y T S G I P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T T T S
S
S S
G G G T G G G
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D Y F K Q S F P E G F T W E R T T I Y E D G A Y L T T Q Q E T K L D G N C L V Y N I K I L G C N F P P N G P V X Q K K T Q G W E P C C E X R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G T T T
T T S
T T
T T S T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y T R D G V L C G Q T L X A L K C A D G N H L T C H L R T T Y R S K K A A K A L Q X P P F H F S D H R P E I V K V S E N G T L F E Q H E S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
S S
G G G
S
T T T T

. . . . . . . . . 220 . . . . .

Sequence V A R Y C Q T C P S K L G H N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	S	D	N	V	R	I	K	L	Y	X	E	G	T	V	N	N	H	H	F	X	C	E	A	E	G	E	G	K	P	Y	E	G	T	Q	X	E	N	I	K	V	T	K	G	G	P	L	P	F	S	F	D	I	L	T	P	N	C	S	V	A	I	T	K	Y	T	S	G	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S												T	T													T	T	T	T											S		S		S	S		G	G	G	T	G	G	G			T	T	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	Y	F	K	Q	S	F	P	E	G	F	T	W	E	R	T	T	I	Y	E	D	G	A	Y	L	T	T	Q	Q	E	T	K	L	D	G	N	C	L	V	Y	N	I	K	I	L	G	C	N	F	P	P	N	G	P	V	X	Q	K	K	T	Q	G	W	E	P	C	C	E	X	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G	T	T	T											T	T	S													T	T															T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	T	R	D	G	V	L	C	G	Q	T	L	X	A	L	K	C	A	D	G	N	H	L	T	C	H	L	R	T	T	Y	R	S	K	K	A	A	K	A	L	Q	X	P	P	F	H	F	S	D	H	R	P	E	I	V	K	V	S	E	N	G	T	L	F	E	Q	H	E	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T													T	T	S														S	S		G	G	G						S														T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	V	A	R	Y	C	Q	T	C	P	S	K	L	G	H	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			S	S	S