Fold library entry viewer: c3fn9B_

Added to library: Tue Mar 16 13:11:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	A	R	Q	V	T	A	F	N	T	G	W	Q	F	K	K	G	P	F	A	T	D	P	M	R	A	A	S	Q	W	D	G	K	W	E	T	V	E	I	P	H	T	W	N	A	M	D	M	Q	V	Q	S	G	S	F	Y	E	G	A	G	Y	Y	R	K	T	Q	F	F	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							S	S										S	S									T	S							S	S			S		T	T	T	T	T	S	S	S	S					S												G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	E	G	K	R	V	F	L	R	F	E	G	V	G	A	C	A	E	V	Y	V	N	G	K	L	A	G	T	H	K	G	G	Y	S	A	F	A	C	E	I	G	T	A	L	K	L	G	A	E	N	E	I	I	V	K	A	D	N	K	A	R	P	D	V	I	P	V	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T								S			B	S							S	S	S								T	T	S							G	G	G			T	T														B	T	T	B	S	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	L	F	G	V	Y	G	G	I	Y	R	P	V	W	L	I	V	T	E	Q	N	N	I	T	V	T	D	C	A	S	P	G	V	Y	I	T	Q	K	D	V	S	K	K	S	A	D	I	T	V	K	V	K	L	D	N	A	G	L	Q	P	A	A	V	T	L	E	N	T	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					B			S									S					S		S	T	T			S							S		S	S	S														S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	Q	E	G	Q	K	V	G	T	H	S	R	S	F	D	L	S	P	Q	G	T	Q	T	Y	L	S	T	F	K	L	K	N	P	H	L	W	Q	G	R	K	D	P	Y	L	Y	K	V	V	C	R	L	M	A	D	G	K	V	I	D	E	V	V	Q	P	L	G	V	R	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S														S	S	S												S						G	G	G														T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	I	V	A	G	K	G	F	F	L	N	G	E	K	Y	S	M	Y	G	V	T	R	H	Q	D	W	W	G	L	G	S	A	L	K	N	E	H	H	D	F	D	L	A	A	I	M	D	V	G	A	T	T	V	R	F	A	H	Y	Q	Q	S	D	Y	L	Y	S	R	C	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T					T	T												S		B	T	T	T	B	T																		T		S					T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	G	L	I	I	W	A	E	I	P	C	V	N	R	V	T	G	Y	E	T	E	N	A	Q	S	Q	L	R	E	L	I	R	Q	S	F	N	H	P	S	I	Y	V	W	G	L	H	N	E	V	Y	Q	P	H	E	Y	T	A	A	L	T	R	S	L	H	D	L	A	K	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T										B	S				S	S																T	T	T		T	T									S			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	P	D	R	Y	T	V	S	V	N	G	Y	G	H	M	D	H	P	V	N	L	N	A	D	I	Q	G	M	N	R	Y	F	G	W	Y	E	K	K	I	Q	D	I	K	P	W	V	E	Q	L	E	K	D	Y	P	Y	Q	K	L	M	L	T	E	Y	G	A	D	A	N	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S							S	S	S		S	S		T	T				S	S								B	T	T	T	B	S		G	G	G													T	T	S												B	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	Q	T	E	Y	L	G	D	A	L	N	W	G	K	P	F	Y	P	E	T	F	Q	T	K	T	H	E	Y	Q	W	S	I	I	K	D	H	P	Y	I	I	A	S	Y	L	W	N	M	F	D	F	A	V	P	M	W	T	R	G	G	V	P	A	R	N	M	K	G	L	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S	S			T	T	S	S			B																	T		T	T	S						S		S	B										T	T									S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	D	R	K	T	K	K	D	S	Y	F	W	Y	K	A	N	W	S	E	E	P	V	L	Y	L	T	Q	R	R	N	A	D	R	E	K	R	T	T	A	V	T	V	Y	S	N	I	G	T	P	K	V	Y	L	N	G	Q	E	L	S	G	I	R	N	G	Y	T	D	V	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			B													S	S						S		S	S			B				S									S	S	S							T	T										S	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Sequence	V	F	D	N	V	S	L	A	D	G	K	N	I	L	K	A	V	V	S	T	K	G	K	E	Y	T	D	E	I	E	W	N	Y	S	G	E	K	N	R	E	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S												T	T													S				T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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